Gene : EXLA2 A. thaliana TAIR10
Primary Identifier:  ? AT4G38400 Defline:  (1 of 3) PTHR31692:SF4 - EXPANSIN-LIKE A1-RELATED
Genomic Order:  3946 Name:  ? AT4G38400
Secondary Identifier:  ? PAC:19648431
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38400 0.5kb upstream 0.5kb upstream 1798 true Chr4: 17978443-17980240 Arabidopsis thaliana
AT4G38400 0.5kb upstream 0.5kb upstream 500 false Chr4: 17979741-17980240 Arabidopsis thaliana
AT4G38400 0.5kb downstream 0.5kb downstream 1798 true Chr4: 17977943-17979740 Arabidopsis thaliana
AT4G38400 0.5kb downstream 0.5kb downstream 500 false Chr4: 17977943-17978442 Arabidopsis thaliana
AT4G38400 1.0kb upstream 1.0kb upstream 2298 true Chr4: 17978443-17980740 Arabidopsis thaliana
AT4G38400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17979741-17980740 Arabidopsis thaliana
AT4G38400 1.0kb downstream 1.0kb downstream 2298 true Chr4: 17977443-17979740 Arabidopsis thaliana
AT4G38400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17977443-17978442 Arabidopsis thaliana
AT4G38400 2.0kb upstream 2.0kb upstream 3298 true Chr4: 17978443-17981740 Arabidopsis thaliana
AT4G38400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17979741-17981740 Arabidopsis thaliana
AT4G38400 2.0kb downstream 2.0kb downstream 3298 true Chr4: 17976443-17979740 Arabidopsis thaliana
AT4G38400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17976443-17978442 Arabidopsis thaliana
AT4G38400 5.0kb upstream 5.0kb upstream 6298 true Chr4: 17978443-17984740 Arabidopsis thaliana
AT4G38400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17979741-17984740 Arabidopsis thaliana
AT4G38400 5.0kb downstream 5.0kb downstream 6298 true Chr4: 17973443-17979740 Arabidopsis thaliana
AT4G38400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17973443-17978442 Arabidopsis thaliana
AT4G38400 10.0kb upstream 10.0kb upstream 11298 true Chr4: 17978443-17989740 Arabidopsis thaliana
AT4G38400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17979741-17989740 Arabidopsis thaliana
AT4G38400 10.0kb downstream 10.0kb downstream 11298 true Chr4: 17968443-17979740 Arabidopsis thaliana
AT4G38400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17968443-17978442 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376684 5261 Brassicaceae View MSA
123831250 5264 Brassicales-Malvales View MSA
124342054 5266 SBM View MSA
124237005 5268 Malvidae View MSA
124063116 5270 Rosid View MSA
123739587 5271 Pentapetalae View MSA
122785615 5272 Eudicot View MSA
122042929 5273 Angiosperm View MSA
121310045 5274 Embryophyte View MSA
123347644 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.78        
cufflinks 79.516     High High
cufflinks 7.022        
cufflinks 47.85     High  
cufflinks 5.675       Low
cufflinks 80.54     High High

0 Strain