Gene : CGL1 A. thaliana TAIR10
Primary Identifier:  ? AT4G38240 Defline:  (1 of 1) 2.4.1.101 - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / 1,2-N-acetylglucosaminyltransferase
Genomic Order:  3930 Name:  ? AT4G38240
Secondary Identifier:  ? PAC:19647316
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7426 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38240 0.5kb upstream 0.5kb upstream 4256 true Chr4: 17931570-17935825 Arabidopsis thaliana
AT4G38240 0.5kb upstream 0.5kb upstream 500 false Chr4: 17935326-17935825 Arabidopsis thaliana
AT4G38240 0.5kb downstream 0.5kb downstream 4256 true Chr4: 17931070-17935325 Arabidopsis thaliana
AT4G38240 0.5kb downstream 0.5kb downstream 500 false Chr4: 17931070-17931569 Arabidopsis thaliana
AT4G38240 1.0kb upstream 1.0kb upstream 4756 true Chr4: 17931570-17936325 Arabidopsis thaliana
AT4G38240 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17935326-17936325 Arabidopsis thaliana
AT4G38240 1.0kb downstream 1.0kb downstream 4756 true Chr4: 17930570-17935325 Arabidopsis thaliana
AT4G38240 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17930570-17931569 Arabidopsis thaliana
AT4G38240 2.0kb upstream 2.0kb upstream 5756 true Chr4: 17931570-17937325 Arabidopsis thaliana
AT4G38240 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17935326-17937325 Arabidopsis thaliana
AT4G38240 2.0kb downstream 2.0kb downstream 5756 true Chr4: 17929570-17935325 Arabidopsis thaliana
AT4G38240 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17929570-17931569 Arabidopsis thaliana
AT4G38240 5.0kb upstream 5.0kb upstream 8756 true Chr4: 17931570-17940325 Arabidopsis thaliana
AT4G38240 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17935326-17940325 Arabidopsis thaliana
AT4G38240 5.0kb downstream 5.0kb downstream 8756 true Chr4: 17926570-17935325 Arabidopsis thaliana
AT4G38240 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17926570-17931569 Arabidopsis thaliana
AT4G38240 10.0kb upstream 10.0kb upstream 13756 true Chr4: 17931570-17945325 Arabidopsis thaliana
AT4G38240 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17935326-17945325 Arabidopsis thaliana
AT4G38240 10.0kb downstream 10.0kb downstream 13756 true Chr4: 17921570-17935325 Arabidopsis thaliana
AT4G38240 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17921570-17931569 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371542 5261 Brassicaceae View MSA
123831005 5264 Brassicales-Malvales View MSA
124342265 5266 SBM View MSA
124241917 5268 Malvidae View MSA
124064877 5270 Rosid View MSA
123753422 5271 Pentapetalae View MSA
122787194 5272 Eudicot View MSA
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.806        
cufflinks 4.475       High
cufflinks 2.645        
cufflinks 4.293       High
cufflinks 2.649        
cufflinks 3.636        

0 Strain