Gene : AT4G38310 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31311//PTHR31311:SF3 - FAMILY NOT NAMED // GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  3937
Name:  ? AT4G38310 Secondary Identifier:  ? PAC:19645310
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5936 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38310 0.5kb upstream 0.5kb upstream 863 true Chr4: 17947982-17948844 Arabidopsis thaliana
AT4G38310 0.5kb upstream 0.5kb upstream 500 false Chr4: 17947982-17948481 Arabidopsis thaliana
AT4G38310 0.5kb downstream 0.5kb downstream 863 true Chr4: 17948482-17949344 Arabidopsis thaliana
AT4G38310 0.5kb downstream 0.5kb downstream 500 false Chr4: 17948845-17949344 Arabidopsis thaliana
AT4G38310 1.0kb upstream 1.0kb upstream 1363 true Chr4: 17947482-17948844 Arabidopsis thaliana
AT4G38310 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17947482-17948481 Arabidopsis thaliana
AT4G38310 1.0kb downstream 1.0kb downstream 1363 true Chr4: 17948482-17949844 Arabidopsis thaliana
AT4G38310 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17948845-17949844 Arabidopsis thaliana
AT4G38310 2.0kb upstream 2.0kb upstream 2363 true Chr4: 17946482-17948844 Arabidopsis thaliana
AT4G38310 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17946482-17948481 Arabidopsis thaliana
AT4G38310 2.0kb downstream 2.0kb downstream 2363 true Chr4: 17948482-17950844 Arabidopsis thaliana
AT4G38310 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17948845-17950844 Arabidopsis thaliana
AT4G38310 5.0kb upstream 5.0kb upstream 5363 true Chr4: 17943482-17948844 Arabidopsis thaliana
AT4G38310 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17943482-17948481 Arabidopsis thaliana
AT4G38310 5.0kb downstream 5.0kb downstream 5363 true Chr4: 17948482-17953844 Arabidopsis thaliana
AT4G38310 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17948845-17953844 Arabidopsis thaliana
AT4G38310 10.0kb upstream 10.0kb upstream 10363 true Chr4: 17938482-17948844 Arabidopsis thaliana
AT4G38310 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17938482-17948481 Arabidopsis thaliana
AT4G38310 10.0kb downstream 10.0kb downstream 10363 true Chr4: 17948482-17958844 Arabidopsis thaliana
AT4G38310 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17948845-17958844 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780133 5273 Angiosperm View MSA
122330492 5261 Brassicaceae Singleton cluster - no MSA
123771734 5264 Brassicales-Malvales Singleton cluster - no MSA
124270261 5266 SBM Singleton cluster - no MSA
124126349 5268 Malvidae Singleton cluster - no MSA
124037969 5270 Rosid View MSA
123745220 5271 Pentapetalae View MSA
122771412 5272 Eudicot View MSA
121051759 5274 Embryophyte View MSA
123091834 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.122     Low  
cufflinks 0.454       High
cufflinks 0.092     Low Low
cufflinks 0.216     Low  
cufflinks 0.124     Low  
cufflinks 0.561       High

0 Strain