Gene : pde191 A. thaliana TAIR10
Primary Identifier:  ? AT4G38160 Defline:  (1 of 1) PTHR13068:SF5 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN
Genomic Order:  3921 Name:  ? AT4G38160
Secondary Identifier:  ? PAC:19648019
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38160 0.5kb upstream 0.5kb upstream 2535 true Chr4: 17901766-17904300 Arabidopsis thaliana
AT4G38160 0.5kb upstream 0.5kb upstream 500 false Chr4: 17901766-17902265 Arabidopsis thaliana
AT4G38160 0.5kb downstream 0.5kb downstream 2535 true Chr4: 17902266-17904800 Arabidopsis thaliana
AT4G38160 0.5kb downstream 0.5kb downstream 500 false Chr4: 17904301-17904800 Arabidopsis thaliana
AT4G38160 1.0kb upstream 1.0kb upstream 3035 true Chr4: 17901266-17904300 Arabidopsis thaliana
AT4G38160 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17901266-17902265 Arabidopsis thaliana
AT4G38160 1.0kb downstream 1.0kb downstream 3035 true Chr4: 17902266-17905300 Arabidopsis thaliana
AT4G38160 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17904301-17905300 Arabidopsis thaliana
AT4G38160 2.0kb upstream 2.0kb upstream 4035 true Chr4: 17900266-17904300 Arabidopsis thaliana
AT4G38160 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17900266-17902265 Arabidopsis thaliana
AT4G38160 2.0kb downstream 2.0kb downstream 4035 true Chr4: 17902266-17906300 Arabidopsis thaliana
AT4G38160 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17904301-17906300 Arabidopsis thaliana
AT4G38160 5.0kb upstream 5.0kb upstream 7035 true Chr4: 17897266-17904300 Arabidopsis thaliana
AT4G38160 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17897266-17902265 Arabidopsis thaliana
AT4G38160 5.0kb downstream 5.0kb downstream 7035 true Chr4: 17902266-17909300 Arabidopsis thaliana
AT4G38160 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17904301-17909300 Arabidopsis thaliana
AT4G38160 10.0kb upstream 10.0kb upstream 12035 true Chr4: 17892266-17904300 Arabidopsis thaliana
AT4G38160 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17892266-17902265 Arabidopsis thaliana
AT4G38160 10.0kb downstream 10.0kb downstream 12035 true Chr4: 17902266-17914300 Arabidopsis thaliana
AT4G38160 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17904301-17914300 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041051 5273 Angiosperm View MSA
122362686 5261 Brassicaceae View MSA
123828016 5264 Brassicales-Malvales View MSA
124337555 5266 SBM View MSA
124244971 5268 Malvidae View MSA
124063564 5270 Rosid View MSA
123745270 5271 Pentapetalae View MSA
122786345 5272 Eudicot View MSA
121348638 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.761        
cufflinks 1.948        
cufflinks 10.776       High
cufflinks 1.562        
cufflinks 8.322        
cufflinks 0.997       Low

0 Strain