Gene : EXPA20 A. thaliana TAIR10
Primary Identifier:  ? AT4G38210 Defline:  (1 of 1) PTHR31867:SF7 - EXPANSIN-A20
Genomic Order:  3926 Name:  ? AT4G38210
Secondary Identifier:  ? PAC:19647147
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Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38210 0.5kb upstream 0.5kb upstream 1718 true Chr4: 17922756-17924473 Arabidopsis thaliana
AT4G38210 0.5kb upstream 0.5kb upstream 500 false Chr4: 17923974-17924473 Arabidopsis thaliana
AT4G38210 0.5kb downstream 0.5kb downstream 1718 true Chr4: 17922256-17923973 Arabidopsis thaliana
AT4G38210 0.5kb downstream 0.5kb downstream 500 false Chr4: 17922256-17922755 Arabidopsis thaliana
AT4G38210 1.0kb upstream 1.0kb upstream 2218 true Chr4: 17922756-17924973 Arabidopsis thaliana
AT4G38210 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17923974-17924973 Arabidopsis thaliana
AT4G38210 1.0kb downstream 1.0kb downstream 2218 true Chr4: 17921756-17923973 Arabidopsis thaliana
AT4G38210 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17921756-17922755 Arabidopsis thaliana
AT4G38210 2.0kb upstream 2.0kb upstream 3218 true Chr4: 17922756-17925973 Arabidopsis thaliana
AT4G38210 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17923974-17925973 Arabidopsis thaliana
AT4G38210 2.0kb downstream 2.0kb downstream 3218 true Chr4: 17920756-17923973 Arabidopsis thaliana
AT4G38210 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17920756-17922755 Arabidopsis thaliana
AT4G38210 5.0kb upstream 5.0kb upstream 6218 true Chr4: 17922756-17928973 Arabidopsis thaliana
AT4G38210 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17923974-17928973 Arabidopsis thaliana
AT4G38210 5.0kb downstream 5.0kb downstream 6218 true Chr4: 17917756-17923973 Arabidopsis thaliana
AT4G38210 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17917756-17922755 Arabidopsis thaliana
AT4G38210 10.0kb upstream 10.0kb upstream 11218 true Chr4: 17922756-17933973 Arabidopsis thaliana
AT4G38210 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17923974-17933973 Arabidopsis thaliana
AT4G38210 10.0kb downstream 10.0kb downstream 11218 true Chr4: 17912756-17923973 Arabidopsis thaliana
AT4G38210 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17912756-17922755 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365737 5261 Brassicaceae View MSA
123829739 5264 Brassicales-Malvales View MSA
124341047 5266 SBM View MSA
124238174 5268 Malvidae View MSA
124065667 5270 Rosid View MSA
123746743 5271 Pentapetalae View MSA
122791118 5272 Eudicot View MSA
122045799 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310504 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.626        
cufflinks 2.953        
cufflinks 2.074        
cufflinks 5.286       High
cufflinks 1.2       Low
cufflinks 4.603        

0 Strain