Gene : AT4G38070 A. thaliana TAIR10
Defline:  (1 of 1) PTHR18937//PTHR18937:SF222 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  3912
Name:  ? AT4G38070 Secondary Identifier:  ? PAC:19647460
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38070 0.5kb upstream 0.5kb upstream 6535 true Chr4: 17876035-17882569 Arabidopsis thaliana
AT4G38070 0.5kb upstream 0.5kb upstream 500 false Chr4: 17876035-17876534 Arabidopsis thaliana
AT4G38070 0.5kb downstream 0.5kb downstream 6535 true Chr4: 17876535-17883069 Arabidopsis thaliana
AT4G38070 0.5kb downstream 0.5kb downstream 500 false Chr4: 17882570-17883069 Arabidopsis thaliana
AT4G38070 1.0kb upstream 1.0kb upstream 7035 true Chr4: 17875535-17882569 Arabidopsis thaliana
AT4G38070 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17875535-17876534 Arabidopsis thaliana
AT4G38070 1.0kb downstream 1.0kb downstream 7035 true Chr4: 17876535-17883569 Arabidopsis thaliana
AT4G38070 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17882570-17883569 Arabidopsis thaliana
AT4G38070 2.0kb upstream 2.0kb upstream 8035 true Chr4: 17874535-17882569 Arabidopsis thaliana
AT4G38070 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17874535-17876534 Arabidopsis thaliana
AT4G38070 2.0kb downstream 2.0kb downstream 8035 true Chr4: 17876535-17884569 Arabidopsis thaliana
AT4G38070 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17882570-17884569 Arabidopsis thaliana
AT4G38070 5.0kb upstream 5.0kb upstream 11035 true Chr4: 17871535-17882569 Arabidopsis thaliana
AT4G38070 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17871535-17876534 Arabidopsis thaliana
AT4G38070 5.0kb downstream 5.0kb downstream 11035 true Chr4: 17876535-17887569 Arabidopsis thaliana
AT4G38070 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17882570-17887569 Arabidopsis thaliana
AT4G38070 10.0kb upstream 10.0kb upstream 16035 true Chr4: 17866535-17882569 Arabidopsis thaliana
AT4G38070 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17866535-17876534 Arabidopsis thaliana
AT4G38070 10.0kb downstream 10.0kb downstream 16035 true Chr4: 17876535-17892569 Arabidopsis thaliana
AT4G38070 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17882570-17892569 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122330694 5261 Brassicaceae Singleton cluster - no MSA
123837437 5264 Brassicales-Malvales View MSA
124322305 5266 SBM View MSA
124254187 5268 Malvidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.976        
cufflinks 1.827        
cufflinks 0.441       Low
cufflinks 1.877        
cufflinks 0.369       Low
cufflinks 3.154       High

0 Strain