Gene : SCAR4 A. thaliana TAIR10
Primary Identifier:  ? AT5G01730 Defline:  (1 of 2) PTHR12902:SF12 - PROTEIN SCAR2-RELATED
Genomic Order:  78 Name:  ? AT5G01730
Secondary Identifier:  ? PAC:19667272
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01730 0.5kb upstream 0.5kb upstream 5230 true Chr5: 272832-278061 Arabidopsis thaliana
AT5G01730 0.5kb upstream 0.5kb upstream 500 false Chr5: 277562-278061 Arabidopsis thaliana
AT5G01730 0.5kb downstream 0.5kb downstream 5230 true Chr5: 272332-277561 Arabidopsis thaliana
AT5G01730 0.5kb downstream 0.5kb downstream 500 false Chr5: 272332-272831 Arabidopsis thaliana
AT5G01730 1.0kb upstream 1.0kb upstream 5730 true Chr5: 272832-278561 Arabidopsis thaliana
AT5G01730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 277562-278561 Arabidopsis thaliana
AT5G01730 1.0kb downstream 1.0kb downstream 5730 true Chr5: 271832-277561 Arabidopsis thaliana
AT5G01730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 271832-272831 Arabidopsis thaliana
AT5G01730 2.0kb upstream 2.0kb upstream 6730 true Chr5: 272832-279561 Arabidopsis thaliana
AT5G01730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 277562-279561 Arabidopsis thaliana
AT5G01730 2.0kb downstream 2.0kb downstream 6730 true Chr5: 270832-277561 Arabidopsis thaliana
AT5G01730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 270832-272831 Arabidopsis thaliana
AT5G01730 5.0kb upstream 5.0kb upstream 9730 true Chr5: 272832-282561 Arabidopsis thaliana
AT5G01730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 277562-282561 Arabidopsis thaliana
AT5G01730 5.0kb downstream 5.0kb downstream 9730 true Chr5: 267832-277561 Arabidopsis thaliana
AT5G01730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 267832-272831 Arabidopsis thaliana
AT5G01730 10.0kb upstream 10.0kb upstream 14730 true Chr5: 272832-287561 Arabidopsis thaliana
AT5G01730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 277562-287561 Arabidopsis thaliana
AT5G01730 10.0kb downstream 10.0kb downstream 14730 true Chr5: 262832-277561 Arabidopsis thaliana
AT5G01730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 262832-272831 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377656 5261 Brassicaceae View MSA
123801595 5264 Brassicales-Malvales View MSA
124298877 5266 SBM View MSA
124150421 5268 Malvidae View MSA
124065878 5270 Rosid View MSA
123743804 5271 Pentapetalae View MSA
122797754 5272 Eudicot View MSA
122043443 5273 Angiosperm View MSA
121351143 5274 Embryophyte View MSA
123382024 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.436        
cufflinks 9.354        
cufflinks 2.427       Low
cufflinks 8.476        
cufflinks 2.512        
cufflinks 15.19       High

0 Strain