Gene : AT5G01790 A. thaliana TAIR10
Genomic Order:  85 Name:  ? AT5G01790
Secondary Identifier:  ? PAC:19666686
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01790 0.5kb upstream 0.5kb upstream 1300 true Chr5: 304897-306196 Arabidopsis thaliana
AT5G01790 0.5kb upstream 0.5kb upstream 500 false Chr5: 305697-306196 Arabidopsis thaliana
AT5G01790 0.5kb downstream 0.5kb downstream 1300 true Chr5: 304397-305696 Arabidopsis thaliana
AT5G01790 0.5kb downstream 0.5kb downstream 500 false Chr5: 304397-304896 Arabidopsis thaliana
AT5G01790 1.0kb upstream 1.0kb upstream 1800 true Chr5: 304897-306696 Arabidopsis thaliana
AT5G01790 1.0kb upstream 1.0kb upstream 1000 false Chr5: 305697-306696 Arabidopsis thaliana
AT5G01790 1.0kb downstream 1.0kb downstream 1800 true Chr5: 303897-305696 Arabidopsis thaliana
AT5G01790 1.0kb downstream 1.0kb downstream 1000 false Chr5: 303897-304896 Arabidopsis thaliana
AT5G01790 2.0kb upstream 2.0kb upstream 2800 true Chr5: 304897-307696 Arabidopsis thaliana
AT5G01790 2.0kb upstream 2.0kb upstream 2000 false Chr5: 305697-307696 Arabidopsis thaliana
AT5G01790 2.0kb downstream 2.0kb downstream 2800 true Chr5: 302897-305696 Arabidopsis thaliana
AT5G01790 2.0kb downstream 2.0kb downstream 2000 false Chr5: 302897-304896 Arabidopsis thaliana
AT5G01790 5.0kb upstream 5.0kb upstream 5800 true Chr5: 304897-310696 Arabidopsis thaliana
AT5G01790 5.0kb upstream 5.0kb upstream 5000 false Chr5: 305697-310696 Arabidopsis thaliana
AT5G01790 5.0kb downstream 5.0kb downstream 5800 true Chr5: 299897-305696 Arabidopsis thaliana
AT5G01790 5.0kb downstream 5.0kb downstream 5000 false Chr5: 299897-304896 Arabidopsis thaliana
AT5G01790 10.0kb upstream 10.0kb upstream 10800 true Chr5: 304897-315696 Arabidopsis thaliana
AT5G01790 10.0kb upstream 10.0kb upstream 10000 false Chr5: 305697-315696 Arabidopsis thaliana
AT5G01790 10.0kb downstream 10.0kb downstream 10800 true Chr5: 294897-305696 Arabidopsis thaliana
AT5G01790 10.0kb downstream 10.0kb downstream 10000 false Chr5: 294897-304896 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371849 5261 Brassicaceae View MSA
123800247 5264 Brassicales-Malvales View MSA
124297686 5266 SBM View MSA
124149513 5268 Malvidae View MSA
124069444 5270 Rosid View MSA
123743182 5271 Pentapetalae View MSA
122790998 5272 Eudicot View MSA
122050526 5273 Angiosperm View MSA
121311968 5274 Embryophyte View MSA
123349191 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.752        
cufflinks 25.055       High
cufflinks 5.731        
cufflinks 21.413        
cufflinks 4.109       Low
cufflinks 20.582        

0 Strain