Gene : OFP1 A. thaliana TAIR10
Primary Identifier:  ? AT5G01840 Defline:  (1 of 3) PTHR33057:SF22 - OVATE FAMILY PROTEIN 1-RELATED
Genomic Order:  90 Name:  ? AT5G01840
Secondary Identifier:  ? PAC:19670083
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01840 0.5kb upstream 0.5kb upstream 1465 true Chr5: 324052-325516 Arabidopsis thaliana
AT5G01840 0.5kb upstream 0.5kb upstream 500 false Chr5: 324052-324551 Arabidopsis thaliana
AT5G01840 0.5kb downstream 0.5kb downstream 1465 true Chr5: 324552-326016 Arabidopsis thaliana
AT5G01840 0.5kb downstream 0.5kb downstream 500 false Chr5: 325517-326016 Arabidopsis thaliana
AT5G01840 1.0kb upstream 1.0kb upstream 1965 true Chr5: 323552-325516 Arabidopsis thaliana
AT5G01840 1.0kb upstream 1.0kb upstream 1000 false Chr5: 323552-324551 Arabidopsis thaliana
AT5G01840 1.0kb downstream 1.0kb downstream 1965 true Chr5: 324552-326516 Arabidopsis thaliana
AT5G01840 1.0kb downstream 1.0kb downstream 1000 false Chr5: 325517-326516 Arabidopsis thaliana
AT5G01840 2.0kb upstream 2.0kb upstream 2965 true Chr5: 322552-325516 Arabidopsis thaliana
AT5G01840 2.0kb upstream 2.0kb upstream 2000 false Chr5: 322552-324551 Arabidopsis thaliana
AT5G01840 2.0kb downstream 2.0kb downstream 2965 true Chr5: 324552-327516 Arabidopsis thaliana
AT5G01840 2.0kb downstream 2.0kb downstream 2000 false Chr5: 325517-327516 Arabidopsis thaliana
AT5G01840 5.0kb upstream 5.0kb upstream 5965 true Chr5: 319552-325516 Arabidopsis thaliana
AT5G01840 5.0kb upstream 5.0kb upstream 5000 false Chr5: 319552-324551 Arabidopsis thaliana
AT5G01840 5.0kb downstream 5.0kb downstream 5965 true Chr5: 324552-330516 Arabidopsis thaliana
AT5G01840 5.0kb downstream 5.0kb downstream 5000 false Chr5: 325517-330516 Arabidopsis thaliana
AT5G01840 10.0kb upstream 10.0kb upstream 10965 true Chr5: 314552-325516 Arabidopsis thaliana
AT5G01840 10.0kb upstream 10.0kb upstream 10000 false Chr5: 314552-324551 Arabidopsis thaliana
AT5G01840 10.0kb downstream 10.0kb downstream 10965 true Chr5: 324552-335516 Arabidopsis thaliana
AT5G01840 10.0kb downstream 10.0kb downstream 10000 false Chr5: 325517-335516 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375136 5261 Brassicaceae View MSA
123838582 5264 Brassicales-Malvales View MSA
124350794 5266 SBM View MSA
124251031 5268 Malvidae View MSA
124070169 5270 Rosid View MSA
123750394 5271 Pentapetalae View MSA
122789866 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.792        
cufflinks 20.942        
cufflinks 0.693        
cufflinks 14.136        
cufflinks 0.622        
cufflinks 21.527        

0 Strain