Gene : BRCA2B A. thaliana TAIR10
Primary Identifier:  ? AT5G01630 Defline:  (1 of 2) K08775 - breast cancer 2 susceptibility protein (BRCA2, FANCD1)
Genomic Order:  67 Name:  ? AT5G01630
Secondary Identifier:  ? PAC:19670788
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01630 0.5kb upstream 0.5kb upstream 6561 true Chr5: 234851-241411 Arabidopsis thaliana
AT5G01630 0.5kb upstream 0.5kb upstream 500 false Chr5: 240912-241411 Arabidopsis thaliana
AT5G01630 0.5kb downstream 0.5kb downstream 6561 true Chr5: 234351-240911 Arabidopsis thaliana
AT5G01630 0.5kb downstream 0.5kb downstream 500 false Chr5: 234351-234850 Arabidopsis thaliana
AT5G01630 1.0kb upstream 1.0kb upstream 7061 true Chr5: 234851-241911 Arabidopsis thaliana
AT5G01630 1.0kb upstream 1.0kb upstream 1000 false Chr5: 240912-241911 Arabidopsis thaliana
AT5G01630 1.0kb downstream 1.0kb downstream 7061 true Chr5: 233851-240911 Arabidopsis thaliana
AT5G01630 1.0kb downstream 1.0kb downstream 1000 false Chr5: 233851-234850 Arabidopsis thaliana
AT5G01630 2.0kb upstream 2.0kb upstream 8061 true Chr5: 234851-242911 Arabidopsis thaliana
AT5G01630 2.0kb upstream 2.0kb upstream 2000 false Chr5: 240912-242911 Arabidopsis thaliana
AT5G01630 2.0kb downstream 2.0kb downstream 8061 true Chr5: 232851-240911 Arabidopsis thaliana
AT5G01630 2.0kb downstream 2.0kb downstream 2000 false Chr5: 232851-234850 Arabidopsis thaliana
AT5G01630 5.0kb upstream 5.0kb upstream 11061 true Chr5: 234851-245911 Arabidopsis thaliana
AT5G01630 5.0kb upstream 5.0kb upstream 5000 false Chr5: 240912-245911 Arabidopsis thaliana
AT5G01630 5.0kb downstream 5.0kb downstream 11061 true Chr5: 229851-240911 Arabidopsis thaliana
AT5G01630 5.0kb downstream 5.0kb downstream 5000 false Chr5: 229851-234850 Arabidopsis thaliana
AT5G01630 10.0kb upstream 10.0kb upstream 16061 true Chr5: 234851-250911 Arabidopsis thaliana
AT5G01630 10.0kb upstream 10.0kb upstream 10000 false Chr5: 240912-250911 Arabidopsis thaliana
AT5G01630 10.0kb downstream 10.0kb downstream 16061 true Chr5: 224851-240911 Arabidopsis thaliana
AT5G01630 10.0kb downstream 10.0kb downstream 10000 false Chr5: 224851-234850 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361731 5261 Brassicaceae View MSA
123840779 5264 Brassicales-Malvales View MSA
124336841 5266 SBM View MSA
124247927 5268 Malvidae View MSA
124050402 5270 Rosid View MSA
123749189 5271 Pentapetalae View MSA
122786519 5272 Eudicot View MSA
122044461 5273 Angiosperm View MSA
121310297 5274 Embryophyte View MSA
123425131 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.475        
cufflinks 2.591        
cufflinks 1.153        
cufflinks 2.409        
cufflinks 0.874       Low
cufflinks 2.922       High

0 Strain