Gene : CHX27 A. thaliana TAIR10
Primary Identifier:  ? AT5G01690 Defline:  (1 of 2) PTHR32468:SF12 - CATION/H(+) ANTIPORTER 26-RELATED
Genomic Order:  73 Name:  ? AT5G01690
Secondary Identifier:  ? PAC:19672889
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01690 0.5kb upstream 0.5kb upstream 3436 true Chr5: 256910-260345 Arabidopsis thaliana
AT5G01690 0.5kb upstream 0.5kb upstream 500 false Chr5: 256910-257409 Arabidopsis thaliana
AT5G01690 0.5kb downstream 0.5kb downstream 3436 true Chr5: 257410-260845 Arabidopsis thaliana
AT5G01690 0.5kb downstream 0.5kb downstream 500 false Chr5: 260346-260845 Arabidopsis thaliana
AT5G01690 1.0kb upstream 1.0kb upstream 3936 true Chr5: 256410-260345 Arabidopsis thaliana
AT5G01690 1.0kb upstream 1.0kb upstream 1000 false Chr5: 256410-257409 Arabidopsis thaliana
AT5G01690 1.0kb downstream 1.0kb downstream 3936 true Chr5: 257410-261345 Arabidopsis thaliana
AT5G01690 1.0kb downstream 1.0kb downstream 1000 false Chr5: 260346-261345 Arabidopsis thaliana
AT5G01690 2.0kb upstream 2.0kb upstream 4936 true Chr5: 255410-260345 Arabidopsis thaliana
AT5G01690 2.0kb upstream 2.0kb upstream 2000 false Chr5: 255410-257409 Arabidopsis thaliana
AT5G01690 2.0kb downstream 2.0kb downstream 4936 true Chr5: 257410-262345 Arabidopsis thaliana
AT5G01690 2.0kb downstream 2.0kb downstream 2000 false Chr5: 260346-262345 Arabidopsis thaliana
AT5G01690 5.0kb upstream 5.0kb upstream 7936 true Chr5: 252410-260345 Arabidopsis thaliana
AT5G01690 5.0kb upstream 5.0kb upstream 5000 false Chr5: 252410-257409 Arabidopsis thaliana
AT5G01690 5.0kb downstream 5.0kb downstream 7936 true Chr5: 257410-265345 Arabidopsis thaliana
AT5G01690 5.0kb downstream 5.0kb downstream 5000 false Chr5: 260346-265345 Arabidopsis thaliana
AT5G01690 10.0kb upstream 10.0kb upstream 12936 true Chr5: 247410-260345 Arabidopsis thaliana
AT5G01690 10.0kb upstream 10.0kb upstream 10000 false Chr5: 247410-257409 Arabidopsis thaliana
AT5G01690 10.0kb downstream 10.0kb downstream 12936 true Chr5: 257410-270345 Arabidopsis thaliana
AT5G01690 10.0kb downstream 10.0kb downstream 10000 false Chr5: 260346-270345 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371808 5261 Brassicaceae View MSA
123800237 5264 Brassicales-Malvales View MSA
124349929 5266 SBM View MSA
124247151 5268 Malvidae View MSA
123952123 5270 Rosid View MSA
123751548 5271 Pentapetalae View MSA
122797221 5272 Eudicot View MSA
122049738 5273 Angiosperm View MSA
121311566 5274 Embryophyte View MSA
123428827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low High
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain