Gene : CAX4 A. thaliana TAIR10
Primary Identifier:  ? AT5G01490 Defline:  (1 of 5) K07300 - Ca2+:H+ antiporter (chaA, CAX)
Genomic Order:  53 Name:  ? AT5G01490
Secondary Identifier:  ? PAC:19667619
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01490 0.5kb upstream 0.5kb upstream 3484 true Chr5: 195041-198524 Arabidopsis thaliana
AT5G01490 0.5kb upstream 0.5kb upstream 500 false Chr5: 195041-195540 Arabidopsis thaliana
AT5G01490 0.5kb downstream 0.5kb downstream 3484 true Chr5: 195541-199024 Arabidopsis thaliana
AT5G01490 0.5kb downstream 0.5kb downstream 500 false Chr5: 198525-199024 Arabidopsis thaliana
AT5G01490 1.0kb upstream 1.0kb upstream 3984 true Chr5: 194541-198524 Arabidopsis thaliana
AT5G01490 1.0kb upstream 1.0kb upstream 1000 false Chr5: 194541-195540 Arabidopsis thaliana
AT5G01490 1.0kb downstream 1.0kb downstream 3984 true Chr5: 195541-199524 Arabidopsis thaliana
AT5G01490 1.0kb downstream 1.0kb downstream 1000 false Chr5: 198525-199524 Arabidopsis thaliana
AT5G01490 2.0kb upstream 2.0kb upstream 4984 true Chr5: 193541-198524 Arabidopsis thaliana
AT5G01490 2.0kb upstream 2.0kb upstream 2000 false Chr5: 193541-195540 Arabidopsis thaliana
AT5G01490 2.0kb downstream 2.0kb downstream 4984 true Chr5: 195541-200524 Arabidopsis thaliana
AT5G01490 2.0kb downstream 2.0kb downstream 2000 false Chr5: 198525-200524 Arabidopsis thaliana
AT5G01490 5.0kb upstream 5.0kb upstream 7984 true Chr5: 190541-198524 Arabidopsis thaliana
AT5G01490 5.0kb upstream 5.0kb upstream 5000 false Chr5: 190541-195540 Arabidopsis thaliana
AT5G01490 5.0kb downstream 5.0kb downstream 7984 true Chr5: 195541-203524 Arabidopsis thaliana
AT5G01490 5.0kb downstream 5.0kb downstream 5000 false Chr5: 198525-203524 Arabidopsis thaliana
AT5G01490 10.0kb upstream 10.0kb upstream 12984 true Chr5: 185541-198524 Arabidopsis thaliana
AT5G01490 10.0kb upstream 10.0kb upstream 10000 false Chr5: 185541-195540 Arabidopsis thaliana
AT5G01490 10.0kb downstream 10.0kb downstream 12984 true Chr5: 195541-208524 Arabidopsis thaliana
AT5G01490 10.0kb downstream 10.0kb downstream 10000 false Chr5: 198525-208524 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511743 5273 Angiosperm View MSA
122378532 5261 Brassicaceae View MSA
123801900 5264 Brassicales-Malvales View MSA
124299150 5266 SBM View MSA
124150640 5268 Malvidae View MSA
123876221 5270 Rosid View MSA
123459922 5271 Pentapetalae View MSA
122495304 5272 Eudicot View MSA
120784775 5274 Embryophyte View MSA
122826669 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low Low
cufflinks 0.32     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.141        
cufflinks 0.016     Low Low
cufflinks 1.82       High

0 Strain