Gene : AT5G01225 A. thaliana TAIR10
Genomic Order:  25 Name:  ? AT5G01225
Secondary Identifier:  ? PAC:19672476
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01225 0.5kb upstream 0.5kb upstream 905 true Chr5: 91420-92324 Arabidopsis thaliana
AT5G01225 0.5kb upstream 0.5kb upstream 500 false Chr5: 91420-91919 Arabidopsis thaliana
AT5G01225 0.5kb downstream 0.5kb downstream 905 true Chr5: 91920-92824 Arabidopsis thaliana
AT5G01225 0.5kb downstream 0.5kb downstream 500 false Chr5: 92325-92824 Arabidopsis thaliana
AT5G01225 1.0kb upstream 1.0kb upstream 1405 true Chr5: 90920-92324 Arabidopsis thaliana
AT5G01225 1.0kb upstream 1.0kb upstream 1000 false Chr5: 90920-91919 Arabidopsis thaliana
AT5G01225 1.0kb downstream 1.0kb downstream 1405 true Chr5: 91920-93324 Arabidopsis thaliana
AT5G01225 1.0kb downstream 1.0kb downstream 1000 false Chr5: 92325-93324 Arabidopsis thaliana
AT5G01225 2.0kb upstream 2.0kb upstream 2405 true Chr5: 89920-92324 Arabidopsis thaliana
AT5G01225 2.0kb upstream 2.0kb upstream 2000 false Chr5: 89920-91919 Arabidopsis thaliana
AT5G01225 2.0kb downstream 2.0kb downstream 2405 true Chr5: 91920-94324 Arabidopsis thaliana
AT5G01225 2.0kb downstream 2.0kb downstream 2000 false Chr5: 92325-94324 Arabidopsis thaliana
AT5G01225 5.0kb upstream 5.0kb upstream 5405 true Chr5: 86920-92324 Arabidopsis thaliana
AT5G01225 5.0kb upstream 5.0kb upstream 5000 false Chr5: 86920-91919 Arabidopsis thaliana
AT5G01225 5.0kb downstream 5.0kb downstream 5405 true Chr5: 91920-97324 Arabidopsis thaliana
AT5G01225 5.0kb downstream 5.0kb downstream 5000 false Chr5: 92325-97324 Arabidopsis thaliana
AT5G01225 10.0kb upstream 10.0kb upstream 10405 true Chr5: 81920-92324 Arabidopsis thaliana
AT5G01225 10.0kb upstream 10.0kb upstream 10000 false Chr5: 81920-91919 Arabidopsis thaliana
AT5G01225 10.0kb downstream 10.0kb downstream 10405 true Chr5: 91920-102324 Arabidopsis thaliana
AT5G01225 10.0kb downstream 10.0kb downstream 10000 false Chr5: 92325-102324 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361011 5261 Brassicaceae View MSA
123836928 5264 Brassicales-Malvales View MSA
124344603 5266 SBM View MSA
124249096 5268 Malvidae View MSA
124062802 5270 Rosid View MSA
123741869 5271 Pentapetalae View MSA
122770150 5272 Eudicot View MSA
122050114 5273 Angiosperm View MSA
121311748 5274 Embryophyte View MSA
123349004 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.145     Low Low
cufflinks 0.451        
cufflinks 0.199     Low  
cufflinks 1.866       High
cufflinks 0.669        
cufflinks 1.019        

0 Strain