Gene : AT5G01140 A. thaliana TAIR10
Defline:  (1 of 9) PTHR33103//PTHR33103:SF4 - FAMILY NOT NAMED // EMB|CAB69840.1 Genomic Order:  16
Name:  ? AT5G01140 Secondary Identifier:  ? PAC:19671724
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01140 0.5kb upstream 0.5kb upstream 2047 true Chr5: 49391-51437 Arabidopsis thaliana
AT5G01140 0.5kb upstream 0.5kb upstream 500 false Chr5: 49391-49890 Arabidopsis thaliana
AT5G01140 0.5kb downstream 0.5kb downstream 2047 true Chr5: 49891-51937 Arabidopsis thaliana
AT5G01140 0.5kb downstream 0.5kb downstream 500 false Chr5: 51438-51937 Arabidopsis thaliana
AT5G01140 1.0kb upstream 1.0kb upstream 2547 true Chr5: 48891-51437 Arabidopsis thaliana
AT5G01140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 48891-49890 Arabidopsis thaliana
AT5G01140 1.0kb downstream 1.0kb downstream 2547 true Chr5: 49891-52437 Arabidopsis thaliana
AT5G01140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 51438-52437 Arabidopsis thaliana
AT5G01140 2.0kb upstream 2.0kb upstream 3547 true Chr5: 47891-51437 Arabidopsis thaliana
AT5G01140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 47891-49890 Arabidopsis thaliana
AT5G01140 2.0kb downstream 2.0kb downstream 3547 true Chr5: 49891-53437 Arabidopsis thaliana
AT5G01140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 51438-53437 Arabidopsis thaliana
AT5G01140 5.0kb upstream 5.0kb upstream 6547 true Chr5: 44891-51437 Arabidopsis thaliana
AT5G01140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 44891-49890 Arabidopsis thaliana
AT5G01140 5.0kb downstream 5.0kb downstream 6547 true Chr5: 49891-56437 Arabidopsis thaliana
AT5G01140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 51438-56437 Arabidopsis thaliana
AT5G01140 10.0kb upstream 10.0kb upstream 11547 true Chr5: 39891-51437 Arabidopsis thaliana
AT5G01140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 39891-49890 Arabidopsis thaliana
AT5G01140 10.0kb downstream 10.0kb downstream 11547 true Chr5: 49891-61437 Arabidopsis thaliana
AT5G01140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 51438-61437 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029295 5273 Angiosperm View MSA
122331934 5261 Brassicaceae View MSA
123839736 5264 Brassicales-Malvales View MSA
124322643 5266 SBM View MSA
124244931 5268 Malvidae View MSA
124073247 5270 Rosid View MSA
123752528 5271 Pentapetalae View MSA
122797868 5272 Eudicot View MSA
121350471 5274 Embryophyte View MSA
123381749 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.026     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain