Gene : AT5G01170 A. thaliana TAIR10
Defline:  (1 of 7) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  19
Name:  ? AT5G01170 Secondary Identifier:  ? PAC:19668710
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01170 0.5kb upstream 0.5kb upstream 2475 true Chr5: 57662-60136 Arabidopsis thaliana
AT5G01170 0.5kb upstream 0.5kb upstream 500 false Chr5: 57662-58161 Arabidopsis thaliana
AT5G01170 0.5kb downstream 0.5kb downstream 2475 true Chr5: 58162-60636 Arabidopsis thaliana
AT5G01170 0.5kb downstream 0.5kb downstream 500 false Chr5: 60137-60636 Arabidopsis thaliana
AT5G01170 1.0kb upstream 1.0kb upstream 2975 true Chr5: 57162-60136 Arabidopsis thaliana
AT5G01170 1.0kb upstream 1.0kb upstream 1000 false Chr5: 57162-58161 Arabidopsis thaliana
AT5G01170 1.0kb downstream 1.0kb downstream 2975 true Chr5: 58162-61136 Arabidopsis thaliana
AT5G01170 1.0kb downstream 1.0kb downstream 1000 false Chr5: 60137-61136 Arabidopsis thaliana
AT5G01170 2.0kb upstream 2.0kb upstream 3975 true Chr5: 56162-60136 Arabidopsis thaliana
AT5G01170 2.0kb upstream 2.0kb upstream 2000 false Chr5: 56162-58161 Arabidopsis thaliana
AT5G01170 2.0kb downstream 2.0kb downstream 3975 true Chr5: 58162-62136 Arabidopsis thaliana
AT5G01170 2.0kb downstream 2.0kb downstream 2000 false Chr5: 60137-62136 Arabidopsis thaliana
AT5G01170 5.0kb upstream 5.0kb upstream 6975 true Chr5: 53162-60136 Arabidopsis thaliana
AT5G01170 5.0kb upstream 5.0kb upstream 5000 false Chr5: 53162-58161 Arabidopsis thaliana
AT5G01170 5.0kb downstream 5.0kb downstream 6975 true Chr5: 58162-65136 Arabidopsis thaliana
AT5G01170 5.0kb downstream 5.0kb downstream 5000 false Chr5: 60137-65136 Arabidopsis thaliana
AT5G01170 10.0kb upstream 10.0kb upstream 11975 true Chr5: 48162-60136 Arabidopsis thaliana
AT5G01170 10.0kb upstream 10.0kb upstream 10000 false Chr5: 48162-58161 Arabidopsis thaliana
AT5G01170 10.0kb downstream 10.0kb downstream 11975 true Chr5: 58162-70136 Arabidopsis thaliana
AT5G01170 10.0kb downstream 10.0kb downstream 10000 false Chr5: 60137-70136 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374439 5261 Brassicaceae View MSA
123800759 5264 Brassicales-Malvales View MSA
124298132 5266 SBM View MSA
124149854 5268 Malvidae View MSA
123875580 5270 Rosid View MSA
123459379 5271 Pentapetalae View MSA
122494770 5272 Eudicot View MSA
122051707 5273 Angiosperm View MSA
121312622 5274 Embryophyte View MSA
123349777 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.645        
cufflinks 25.788        
cufflinks 1.448        
cufflinks 24.112        
cufflinks 1.543        
cufflinks 26.04        

0 Strain