Gene : AT5G01010 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23324//PTHR23324:SF45 - SEC14 RELATED PROTEIN Genomic Order:  1
Name:  ? AT5G01010 Secondary Identifier:  ? PAC:19672579
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01010 0.5kb upstream 0.5kb upstream 4339 true Chr5: 1223-5561 Arabidopsis thaliana
AT5G01010 0.5kb upstream 0.5kb upstream 500 false Chr5: 5062-5561 Arabidopsis thaliana
AT5G01010 0.5kb downstream 0.5kb downstream 4339 true Chr5: 723-5061 Arabidopsis thaliana
AT5G01010 0.5kb downstream 0.5kb downstream 500 false Chr5: 723-1222 Arabidopsis thaliana
AT5G01010 1.0kb upstream 1.0kb upstream 4839 true Chr5: 1223-6061 Arabidopsis thaliana
AT5G01010 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5062-6061 Arabidopsis thaliana
AT5G01010 1.0kb downstream 1.0kb downstream 4839 true Chr5: 223-5061 Arabidopsis thaliana
AT5G01010 1.0kb downstream 1.0kb downstream 1000 false Chr5: 223-1222 Arabidopsis thaliana
AT5G01010 2.0kb upstream 2.0kb upstream 5839 true Chr5: 1223-7061 Arabidopsis thaliana
AT5G01010 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5062-7061 Arabidopsis thaliana
AT5G01010 2.0kb downstream 2.0kb downstream 5061 true Chr5: 1-5061 Arabidopsis thaliana
AT5G01010 2.0kb downstream 2.0kb downstream 1222 false Chr5: 1-1222 Arabidopsis thaliana
AT5G01010 5.0kb upstream 5.0kb upstream 8839 true Chr5: 1223-10061 Arabidopsis thaliana
AT5G01010 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5062-10061 Arabidopsis thaliana
AT5G01010 5.0kb downstream 5.0kb downstream 5061 true Chr5: 1-5061 Arabidopsis thaliana
AT5G01010 5.0kb downstream 5.0kb downstream 1222 false Chr5: 1-1222 Arabidopsis thaliana
AT5G01010 10.0kb upstream 10.0kb upstream 13839 true Chr5: 1223-15061 Arabidopsis thaliana
AT5G01010 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5062-15061 Arabidopsis thaliana
AT5G01010 10.0kb downstream 10.0kb downstream 5061 true Chr5: 1-5061 Arabidopsis thaliana
AT5G01010 10.0kb downstream 10.0kb downstream 1222 false Chr5: 1-1222 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026525 5273 Angiosperm View MSA
122369027 5261 Brassicaceae View MSA
123834758 5264 Brassicales-Malvales View MSA
124338318 5266 SBM View MSA
124239160 5268 Malvidae View MSA
124063950 5270 Rosid View MSA
123740798 5271 Pentapetalae View MSA
122786115 5272 Eudicot View MSA
121346667 5274 Embryophyte View MSA
123426655 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.54        
cufflinks 6.331        
cufflinks 7.026        
cufflinks 6.612        
cufflinks 7.683       High
cufflinks 5.979       Low

0 Strain