Gene : AT4G39960 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24078:SF315 - MOLECULAR CHAPERONE DNAJ Genomic Order:  4110
Name:  ? AT4G39960 Secondary Identifier:  ? PAC:19645554
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39960 0.5kb upstream 0.5kb upstream 3364 true Chr4: 18533255-18536618 Arabidopsis thaliana
AT4G39960 0.5kb upstream 0.5kb upstream 500 false Chr4: 18533255-18533754 Arabidopsis thaliana
AT4G39960 0.5kb downstream 0.5kb downstream 3364 true Chr4: 18533755-18537118 Arabidopsis thaliana
AT4G39960 0.5kb downstream 0.5kb downstream 500 false Chr4: 18536619-18537118 Arabidopsis thaliana
AT4G39960 1.0kb upstream 1.0kb upstream 3864 true Chr4: 18532755-18536618 Arabidopsis thaliana
AT4G39960 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18532755-18533754 Arabidopsis thaliana
AT4G39960 1.0kb downstream 1.0kb downstream 3864 true Chr4: 18533755-18537618 Arabidopsis thaliana
AT4G39960 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18536619-18537618 Arabidopsis thaliana
AT4G39960 2.0kb upstream 2.0kb upstream 4864 true Chr4: 18531755-18536618 Arabidopsis thaliana
AT4G39960 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18531755-18533754 Arabidopsis thaliana
AT4G39960 2.0kb downstream 2.0kb downstream 4864 true Chr4: 18533755-18538618 Arabidopsis thaliana
AT4G39960 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18536619-18538618 Arabidopsis thaliana
AT4G39960 5.0kb upstream 5.0kb upstream 7864 true Chr4: 18528755-18536618 Arabidopsis thaliana
AT4G39960 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18528755-18533754 Arabidopsis thaliana
AT4G39960 5.0kb downstream 5.0kb downstream 7864 true Chr4: 18533755-18541618 Arabidopsis thaliana
AT4G39960 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18536619-18541618 Arabidopsis thaliana
AT4G39960 10.0kb upstream 10.0kb upstream 12864 true Chr4: 18523755-18536618 Arabidopsis thaliana
AT4G39960 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18523755-18533754 Arabidopsis thaliana
AT4G39960 10.0kb downstream 10.0kb downstream 12864 true Chr4: 18533755-18546618 Arabidopsis thaliana
AT4G39960 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18536619-18546618 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368341 5261 Brassicaceae View MSA
123836758 5264 Brassicales-Malvales View MSA
124339896 5266 SBM View MSA
124252545 5268 Malvidae View MSA
124065985 5270 Rosid View MSA
123746973 5271 Pentapetalae View MSA
122789651 5272 Eudicot View MSA
122046285 5273 Angiosperm View MSA
121345054 5274 Embryophyte View MSA
123424364 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.735     High High
cufflinks 8.139        
cufflinks 32.178     High High
cufflinks 7.86        
cufflinks 21.253        
cufflinks 8.474        

0 Strain