Gene : RABA4B A. thaliana TAIR10
Primary Identifier:  ? AT4G39990 Defline:  (1 of 1) PTHR24073//PTHR24073:SF517 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA4B-RELATED
Genomic Order:  4114 Name:  ? AT4G39990
Secondary Identifier:  ? PAC:19647748
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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39990 0.5kb upstream 0.5kb upstream 1928 true Chr4: 18542051-18543978 Arabidopsis thaliana
AT4G39990 0.5kb upstream 0.5kb upstream 500 false Chr4: 18542051-18542550 Arabidopsis thaliana
AT4G39990 0.5kb downstream 0.5kb downstream 1928 true Chr4: 18542551-18544478 Arabidopsis thaliana
AT4G39990 0.5kb downstream 0.5kb downstream 500 false Chr4: 18543979-18544478 Arabidopsis thaliana
AT4G39990 1.0kb upstream 1.0kb upstream 2428 true Chr4: 18541551-18543978 Arabidopsis thaliana
AT4G39990 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18541551-18542550 Arabidopsis thaliana
AT4G39990 1.0kb downstream 1.0kb downstream 2428 true Chr4: 18542551-18544978 Arabidopsis thaliana
AT4G39990 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18543979-18544978 Arabidopsis thaliana
AT4G39990 2.0kb upstream 2.0kb upstream 3428 true Chr4: 18540551-18543978 Arabidopsis thaliana
AT4G39990 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18540551-18542550 Arabidopsis thaliana
AT4G39990 2.0kb downstream 2.0kb downstream 3428 true Chr4: 18542551-18545978 Arabidopsis thaliana
AT4G39990 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18543979-18545978 Arabidopsis thaliana
AT4G39990 5.0kb upstream 5.0kb upstream 6428 true Chr4: 18537551-18543978 Arabidopsis thaliana
AT4G39990 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18537551-18542550 Arabidopsis thaliana
AT4G39990 5.0kb downstream 5.0kb downstream 6428 true Chr4: 18542551-18548978 Arabidopsis thaliana
AT4G39990 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18543979-18548978 Arabidopsis thaliana
AT4G39990 10.0kb upstream 10.0kb upstream 11428 true Chr4: 18532551-18543978 Arabidopsis thaliana
AT4G39990 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18532551-18542550 Arabidopsis thaliana
AT4G39990 10.0kb downstream 10.0kb downstream 11428 true Chr4: 18542551-18553978 Arabidopsis thaliana
AT4G39990 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18543979-18553978 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370819 5261 Brassicaceae View MSA
123800048 5264 Brassicales-Malvales View MSA
124297505 5266 SBM View MSA
124250798 5268 Malvidae View MSA
124067588 5270 Rosid View MSA
123750991 5271 Pentapetalae View MSA
122787491 5272 Eudicot View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.041        
cufflinks 49.423     High  
cufflinks 18.128       Low
cufflinks 43.586     High  
cufflinks 17.192       Low
cufflinks 58.629     High High

0 Strain