Gene : AT4G39850 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11384//PTHR11384:SF30 - ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER // SUBFAMILY NOT NAMED Genomic Order:  4095
Name:  ? AT4G39850 Secondary Identifier:  ? PAC:19644551
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39850 0.5kb upstream 0.5kb upstream 9200 true Chr4: 18487937-18497136 Arabidopsis thaliana
AT4G39850 0.5kb upstream 0.5kb upstream 500 false Chr4: 18487937-18488436 Arabidopsis thaliana
AT4G39850 0.5kb downstream 0.5kb downstream 9200 true Chr4: 18488437-18497636 Arabidopsis thaliana
AT4G39850 0.5kb downstream 0.5kb downstream 500 false Chr4: 18497137-18497636 Arabidopsis thaliana
AT4G39850 1.0kb upstream 1.0kb upstream 9700 true Chr4: 18487437-18497136 Arabidopsis thaliana
AT4G39850 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18487437-18488436 Arabidopsis thaliana
AT4G39850 1.0kb downstream 1.0kb downstream 9700 true Chr4: 18488437-18498136 Arabidopsis thaliana
AT4G39850 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18497137-18498136 Arabidopsis thaliana
AT4G39850 2.0kb upstream 2.0kb upstream 10700 true Chr4: 18486437-18497136 Arabidopsis thaliana
AT4G39850 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18486437-18488436 Arabidopsis thaliana
AT4G39850 2.0kb downstream 2.0kb downstream 10700 true Chr4: 18488437-18499136 Arabidopsis thaliana
AT4G39850 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18497137-18499136 Arabidopsis thaliana
AT4G39850 5.0kb upstream 5.0kb upstream 13700 true Chr4: 18483437-18497136 Arabidopsis thaliana
AT4G39850 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18483437-18488436 Arabidopsis thaliana
AT4G39850 5.0kb downstream 5.0kb downstream 13700 true Chr4: 18488437-18502136 Arabidopsis thaliana
AT4G39850 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18497137-18502136 Arabidopsis thaliana
AT4G39850 10.0kb upstream 10.0kb upstream 18700 true Chr4: 18478437-18497136 Arabidopsis thaliana
AT4G39850 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18478437-18488436 Arabidopsis thaliana
AT4G39850 10.0kb downstream 10.0kb downstream 18700 true Chr4: 18488437-18507136 Arabidopsis thaliana
AT4G39850 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18497137-18507136 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364180 5261 Brassicaceae View MSA
123832902 5264 Brassicales-Malvales View MSA
124342557 5266 SBM View MSA
124253124 5268 Malvidae View MSA
124050169 5270 Rosid View MSA
123738081 5271 Pentapetalae View MSA
122785756 5272 Eudicot View MSA
122046456 5273 Angiosperm View MSA
121348971 5274 Embryophyte View MSA
123424415 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.064       Low
cufflinks 3.775        
cufflinks 3.058       Low
cufflinks 4.159       High
cufflinks 3.458        
cufflinks 3.718        

0 Strain