Gene : AT4G39955 A. thaliana TAIR10
Defline:  (1 of 92) 3.1.1.3 - Triacylglycerol lipase / Triglyceride lipase Genomic Order:  4109
Name:  ? AT4G39955 Secondary Identifier:  ? PAC:19644838
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPAS-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39955 0.5kb upstream 0.5kb upstream 2217 true Chr4: 18530043-18532259 Arabidopsis thaliana
AT4G39955 0.5kb upstream 0.5kb upstream 500 false Chr4: 18530043-18530542 Arabidopsis thaliana
AT4G39955 0.5kb downstream 0.5kb downstream 2217 true Chr4: 18530543-18532759 Arabidopsis thaliana
AT4G39955 0.5kb downstream 0.5kb downstream 500 false Chr4: 18532260-18532759 Arabidopsis thaliana
AT4G39955 1.0kb upstream 1.0kb upstream 2717 true Chr4: 18529543-18532259 Arabidopsis thaliana
AT4G39955 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18529543-18530542 Arabidopsis thaliana
AT4G39955 1.0kb downstream 1.0kb downstream 2717 true Chr4: 18530543-18533259 Arabidopsis thaliana
AT4G39955 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18532260-18533259 Arabidopsis thaliana
AT4G39955 2.0kb upstream 2.0kb upstream 3717 true Chr4: 18528543-18532259 Arabidopsis thaliana
AT4G39955 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18528543-18530542 Arabidopsis thaliana
AT4G39955 2.0kb downstream 2.0kb downstream 3717 true Chr4: 18530543-18534259 Arabidopsis thaliana
AT4G39955 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18532260-18534259 Arabidopsis thaliana
AT4G39955 5.0kb upstream 5.0kb upstream 6717 true Chr4: 18525543-18532259 Arabidopsis thaliana
AT4G39955 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18525543-18530542 Arabidopsis thaliana
AT4G39955 5.0kb downstream 5.0kb downstream 6717 true Chr4: 18530543-18537259 Arabidopsis thaliana
AT4G39955 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18532260-18537259 Arabidopsis thaliana
AT4G39955 10.0kb upstream 10.0kb upstream 11717 true Chr4: 18520543-18532259 Arabidopsis thaliana
AT4G39955 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18520543-18530542 Arabidopsis thaliana
AT4G39955 10.0kb downstream 10.0kb downstream 11717 true Chr4: 18530543-18542259 Arabidopsis thaliana
AT4G39955 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18532260-18542259 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367140 5261 Brassicaceae View MSA
123841298 5264 Brassicales-Malvales View MSA
124342133 5266 SBM View MSA
124239723 5268 Malvidae View MSA
124070444 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.246       Low
cufflinks 18.738        
cufflinks 8.612        
cufflinks 22.348        
cufflinks 13.876        
cufflinks 20.037        

0 Strain