Gene : AT4G39690 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15415 - MITOFILIN Genomic Order:  4075
Name:  ? AT4G39690 Secondary Identifier:  ? PAC:19645655
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39690 0.5kb upstream 0.5kb upstream 4816 true Chr4: 18417156-18421971 Arabidopsis thaliana
AT4G39690 0.5kb upstream 0.5kb upstream 500 false Chr4: 18417156-18417655 Arabidopsis thaliana
AT4G39690 0.5kb downstream 0.5kb downstream 4816 true Chr4: 18417656-18422471 Arabidopsis thaliana
AT4G39690 0.5kb downstream 0.5kb downstream 500 false Chr4: 18421972-18422471 Arabidopsis thaliana
AT4G39690 1.0kb upstream 1.0kb upstream 5316 true Chr4: 18416656-18421971 Arabidopsis thaliana
AT4G39690 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18416656-18417655 Arabidopsis thaliana
AT4G39690 1.0kb downstream 1.0kb downstream 5316 true Chr4: 18417656-18422971 Arabidopsis thaliana
AT4G39690 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18421972-18422971 Arabidopsis thaliana
AT4G39690 2.0kb upstream 2.0kb upstream 6316 true Chr4: 18415656-18421971 Arabidopsis thaliana
AT4G39690 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18415656-18417655 Arabidopsis thaliana
AT4G39690 2.0kb downstream 2.0kb downstream 6316 true Chr4: 18417656-18423971 Arabidopsis thaliana
AT4G39690 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18421972-18423971 Arabidopsis thaliana
AT4G39690 5.0kb upstream 5.0kb upstream 9316 true Chr4: 18412656-18421971 Arabidopsis thaliana
AT4G39690 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18412656-18417655 Arabidopsis thaliana
AT4G39690 5.0kb downstream 5.0kb downstream 9316 true Chr4: 18417656-18426971 Arabidopsis thaliana
AT4G39690 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18421972-18426971 Arabidopsis thaliana
AT4G39690 10.0kb upstream 10.0kb upstream 14316 true Chr4: 18407656-18421971 Arabidopsis thaliana
AT4G39690 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18407656-18417655 Arabidopsis thaliana
AT4G39690 10.0kb downstream 10.0kb downstream 14316 true Chr4: 18417656-18431971 Arabidopsis thaliana
AT4G39690 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18421972-18431971 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363984 5261 Brassicaceae View MSA
123837519 5264 Brassicales-Malvales View MSA
124345927 5266 SBM View MSA
124245041 5268 Malvidae View MSA
124067111 5270 Rosid View MSA
123736603 5271 Pentapetalae View MSA
122793493 5272 Eudicot View MSA
122049408 5273 Angiosperm View MSA
121349104 5274 Embryophyte View MSA
123425291 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.539        
cufflinks 10.9        
cufflinks 7.835       Low
cufflinks 11.341        
cufflinks 7.846       Low
cufflinks 11.709        

0 Strain