Gene : NST-K1 A. thaliana TAIR10
Primary Identifier:  ? AT4G39390 Defline:  (1 of 3) PTHR11132//PTHR11132:SF73 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED
Genomic Order:  4046 Name:  ? AT4G39390
Secondary Identifier:  ? PAC:19644725
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39390 0.5kb upstream 0.5kb upstream 3068 true Chr4: 18315075-18318142 Arabidopsis thaliana
AT4G39390 0.5kb upstream 0.5kb upstream 500 false Chr4: 18315075-18315574 Arabidopsis thaliana
AT4G39390 0.5kb downstream 0.5kb downstream 3068 true Chr4: 18315575-18318642 Arabidopsis thaliana
AT4G39390 0.5kb downstream 0.5kb downstream 500 false Chr4: 18318143-18318642 Arabidopsis thaliana
AT4G39390 1.0kb upstream 1.0kb upstream 3568 true Chr4: 18314575-18318142 Arabidopsis thaliana
AT4G39390 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18314575-18315574 Arabidopsis thaliana
AT4G39390 1.0kb downstream 1.0kb downstream 3568 true Chr4: 18315575-18319142 Arabidopsis thaliana
AT4G39390 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18318143-18319142 Arabidopsis thaliana
AT4G39390 2.0kb upstream 2.0kb upstream 4568 true Chr4: 18313575-18318142 Arabidopsis thaliana
AT4G39390 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18313575-18315574 Arabidopsis thaliana
AT4G39390 2.0kb downstream 2.0kb downstream 4568 true Chr4: 18315575-18320142 Arabidopsis thaliana
AT4G39390 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18318143-18320142 Arabidopsis thaliana
AT4G39390 5.0kb upstream 5.0kb upstream 7568 true Chr4: 18310575-18318142 Arabidopsis thaliana
AT4G39390 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18310575-18315574 Arabidopsis thaliana
AT4G39390 5.0kb downstream 5.0kb downstream 7568 true Chr4: 18315575-18323142 Arabidopsis thaliana
AT4G39390 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18318143-18323142 Arabidopsis thaliana
AT4G39390 10.0kb upstream 10.0kb upstream 12568 true Chr4: 18305575-18318142 Arabidopsis thaliana
AT4G39390 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18305575-18315574 Arabidopsis thaliana
AT4G39390 10.0kb downstream 10.0kb downstream 12568 true Chr4: 18315575-18328142 Arabidopsis thaliana
AT4G39390 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18318143-18328142 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365665 5261 Brassicaceae View MSA
123841011 5264 Brassicales-Malvales View MSA
124322822 5266 SBM View MSA
124244999 5268 Malvidae View MSA
124070401 5270 Rosid View MSA
123749098 5271 Pentapetalae View MSA
122793336 5272 Eudicot View MSA
122043830 5273 Angiosperm View MSA
121350073 5274 Embryophyte View MSA
123428666 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.473        
cufflinks 2.94        
cufflinks 1.664       Low
cufflinks 3.069        
cufflinks 1.966        
cufflinks 3.31       High

0 Strain