Gene : BRI1 A. thaliana TAIR10
Primary Identifier:  ? AT4G39400 Defline:  (1 of 1) K13415 - protein brassinosteroid insensitive 1 (BRI1)
Genomic Order:  4047 Name:  ? AT4G39400
Secondary Identifier:  ? PAC:19645618
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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39400 0.5kb upstream 0.5kb upstream 4666 true Chr4: 18324161-18328826 Arabidopsis thaliana
AT4G39400 0.5kb upstream 0.5kb upstream 500 false Chr4: 18324161-18324660 Arabidopsis thaliana
AT4G39400 0.5kb downstream 0.5kb downstream 4666 true Chr4: 18324661-18329326 Arabidopsis thaliana
AT4G39400 0.5kb downstream 0.5kb downstream 500 false Chr4: 18328827-18329326 Arabidopsis thaliana
AT4G39400 1.0kb upstream 1.0kb upstream 5166 true Chr4: 18323661-18328826 Arabidopsis thaliana
AT4G39400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18323661-18324660 Arabidopsis thaliana
AT4G39400 1.0kb downstream 1.0kb downstream 5166 true Chr4: 18324661-18329826 Arabidopsis thaliana
AT4G39400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18328827-18329826 Arabidopsis thaliana
AT4G39400 2.0kb upstream 2.0kb upstream 6166 true Chr4: 18322661-18328826 Arabidopsis thaliana
AT4G39400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18322661-18324660 Arabidopsis thaliana
AT4G39400 2.0kb downstream 2.0kb downstream 6166 true Chr4: 18324661-18330826 Arabidopsis thaliana
AT4G39400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18328827-18330826 Arabidopsis thaliana
AT4G39400 5.0kb upstream 5.0kb upstream 9166 true Chr4: 18319661-18328826 Arabidopsis thaliana
AT4G39400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18319661-18324660 Arabidopsis thaliana
AT4G39400 5.0kb downstream 5.0kb downstream 9166 true Chr4: 18324661-18333826 Arabidopsis thaliana
AT4G39400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18328827-18333826 Arabidopsis thaliana
AT4G39400 10.0kb upstream 10.0kb upstream 14166 true Chr4: 18314661-18328826 Arabidopsis thaliana
AT4G39400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18314661-18324660 Arabidopsis thaliana
AT4G39400 10.0kb downstream 10.0kb downstream 14166 true Chr4: 18324661-18338826 Arabidopsis thaliana
AT4G39400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18328827-18338826 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370976 5261 Brassicaceae View MSA
123830014 5264 Brassicales-Malvales View MSA
124344192 5266 SBM View MSA
124242040 5268 Malvidae View MSA
124068647 5270 Rosid View MSA
123750798 5271 Pentapetalae View MSA
122786012 5272 Eudicot View MSA
122051567 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346162 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.927     High High
cufflinks 21.362       Low
cufflinks 36.59     High  
cufflinks 26.213        
cufflinks 33.232     High  
cufflinks 22.205        

0 Strain