Gene : AT5G03850 A. thaliana TAIR10
Defline:  (1 of 3) K02979 - small subunit ribosomal protein S28e (RP-S28e, RPS28) Genomic Order:  305
Name:  ? AT5G03850 Secondary Identifier:  ? PAC:19669843
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03850 0.5kb upstream 0.5kb upstream 1282 true Chr5: 1028340-1029621 Arabidopsis thaliana
AT5G03850 0.5kb upstream 0.5kb upstream 500 false Chr5: 1029122-1029621 Arabidopsis thaliana
AT5G03850 0.5kb downstream 0.5kb downstream 1282 true Chr5: 1027840-1029121 Arabidopsis thaliana
AT5G03850 0.5kb downstream 0.5kb downstream 500 false Chr5: 1027840-1028339 Arabidopsis thaliana
AT5G03850 1.0kb upstream 1.0kb upstream 1782 true Chr5: 1028340-1030121 Arabidopsis thaliana
AT5G03850 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1029122-1030121 Arabidopsis thaliana
AT5G03850 1.0kb downstream 1.0kb downstream 1782 true Chr5: 1027340-1029121 Arabidopsis thaliana
AT5G03850 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1027340-1028339 Arabidopsis thaliana
AT5G03850 2.0kb upstream 2.0kb upstream 2782 true Chr5: 1028340-1031121 Arabidopsis thaliana
AT5G03850 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1029122-1031121 Arabidopsis thaliana
AT5G03850 2.0kb downstream 2.0kb downstream 2782 true Chr5: 1026340-1029121 Arabidopsis thaliana
AT5G03850 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1026340-1028339 Arabidopsis thaliana
AT5G03850 5.0kb upstream 5.0kb upstream 5782 true Chr5: 1028340-1034121 Arabidopsis thaliana
AT5G03850 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1029122-1034121 Arabidopsis thaliana
AT5G03850 5.0kb downstream 5.0kb downstream 5782 true Chr5: 1023340-1029121 Arabidopsis thaliana
AT5G03850 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1023340-1028339 Arabidopsis thaliana
AT5G03850 10.0kb upstream 10.0kb upstream 10782 true Chr5: 1028340-1039121 Arabidopsis thaliana
AT5G03850 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1029122-1039121 Arabidopsis thaliana
AT5G03850 10.0kb downstream 10.0kb downstream 10782 true Chr5: 1018340-1029121 Arabidopsis thaliana
AT5G03850 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1018340-1028339 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026233 5273 Angiosperm View MSA
122378701 5261 Brassicaceae View MSA
123840351 5264 Brassicales-Malvales View MSA
124348472 5266 SBM View MSA
124251279 5268 Malvidae View MSA
124062378 5270 Rosid View MSA
123752334 5271 Pentapetalae View MSA
122796938 5272 Eudicot View MSA
121351383 5274 Embryophyte View MSA
123425094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.783     High  
cufflinks 170.955     High  
cufflinks 107.635     High  
cufflinks 157.388     High  
cufflinks 88.344     High Low
cufflinks 186.997     High High

0 Strain