Gene : AT5G03620 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10795:SF397 - CUCUMISIN-LIKE PROTEIN Genomic Order:  280
Name:  ? AT5G03620 Secondary Identifier:  ? PAC:19668481
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03620 0.5kb upstream 0.5kb upstream 3637 true Chr5: 918238-921874 Arabidopsis thaliana
AT5G03620 0.5kb upstream 0.5kb upstream 500 false Chr5: 918238-918737 Arabidopsis thaliana
AT5G03620 0.5kb downstream 0.5kb downstream 3637 true Chr5: 918738-922374 Arabidopsis thaliana
AT5G03620 0.5kb downstream 0.5kb downstream 500 false Chr5: 921875-922374 Arabidopsis thaliana
AT5G03620 1.0kb upstream 1.0kb upstream 4137 true Chr5: 917738-921874 Arabidopsis thaliana
AT5G03620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 917738-918737 Arabidopsis thaliana
AT5G03620 1.0kb downstream 1.0kb downstream 4137 true Chr5: 918738-922874 Arabidopsis thaliana
AT5G03620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 921875-922874 Arabidopsis thaliana
AT5G03620 2.0kb upstream 2.0kb upstream 5137 true Chr5: 916738-921874 Arabidopsis thaliana
AT5G03620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 916738-918737 Arabidopsis thaliana
AT5G03620 2.0kb downstream 2.0kb downstream 5137 true Chr5: 918738-923874 Arabidopsis thaliana
AT5G03620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 921875-923874 Arabidopsis thaliana
AT5G03620 5.0kb upstream 5.0kb upstream 8137 true Chr5: 913738-921874 Arabidopsis thaliana
AT5G03620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 913738-918737 Arabidopsis thaliana
AT5G03620 5.0kb downstream 5.0kb downstream 8137 true Chr5: 918738-926874 Arabidopsis thaliana
AT5G03620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 921875-926874 Arabidopsis thaliana
AT5G03620 10.0kb upstream 10.0kb upstream 13137 true Chr5: 908738-921874 Arabidopsis thaliana
AT5G03620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 908738-918737 Arabidopsis thaliana
AT5G03620 10.0kb downstream 10.0kb downstream 13137 true Chr5: 918738-931874 Arabidopsis thaliana
AT5G03620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 921875-931874 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370719 5261 Brassicaceae View MSA
123834744 5264 Brassicales-Malvales View MSA
124344165 5266 SBM View MSA
124237012 5268 Malvidae View MSA
124074709 5270 Rosid View MSA
123751509 5271 Pentapetalae View MSA
122797256 5272 Eudicot View MSA
122051606 5273 Angiosperm View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low  
cufflinks 0.129     Low High
cufflinks 0.005     Low  
cufflinks 0.077     Low  
cufflinks 0.005     Low  
cufflinks 0.073     Low  

0 Strain