Gene : LAC11 A. thaliana TAIR10
Primary Identifier:  ? AT5G03260 Defline:  (1 of 1) PTHR11709:SF116 - LACCASE-11
Genomic Order:  237 Name:  ? AT5G03260
Secondary Identifier:  ? PAC:19666234
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03260 0.5kb upstream 0.5kb upstream 2904 true Chr5: 777021-779924 Arabidopsis thaliana
AT5G03260 0.5kb upstream 0.5kb upstream 500 false Chr5: 779425-779924 Arabidopsis thaliana
AT5G03260 0.5kb downstream 0.5kb downstream 2904 true Chr5: 776521-779424 Arabidopsis thaliana
AT5G03260 0.5kb downstream 0.5kb downstream 500 false Chr5: 776521-777020 Arabidopsis thaliana
AT5G03260 1.0kb upstream 1.0kb upstream 3404 true Chr5: 777021-780424 Arabidopsis thaliana
AT5G03260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 779425-780424 Arabidopsis thaliana
AT5G03260 1.0kb downstream 1.0kb downstream 3404 true Chr5: 776021-779424 Arabidopsis thaliana
AT5G03260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 776021-777020 Arabidopsis thaliana
AT5G03260 2.0kb upstream 2.0kb upstream 4404 true Chr5: 777021-781424 Arabidopsis thaliana
AT5G03260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 779425-781424 Arabidopsis thaliana
AT5G03260 2.0kb downstream 2.0kb downstream 4404 true Chr5: 775021-779424 Arabidopsis thaliana
AT5G03260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 775021-777020 Arabidopsis thaliana
AT5G03260 5.0kb upstream 5.0kb upstream 7404 true Chr5: 777021-784424 Arabidopsis thaliana
AT5G03260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 779425-784424 Arabidopsis thaliana
AT5G03260 5.0kb downstream 5.0kb downstream 7404 true Chr5: 772021-779424 Arabidopsis thaliana
AT5G03260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 772021-777020 Arabidopsis thaliana
AT5G03260 10.0kb upstream 10.0kb upstream 12404 true Chr5: 777021-789424 Arabidopsis thaliana
AT5G03260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 779425-789424 Arabidopsis thaliana
AT5G03260 10.0kb downstream 10.0kb downstream 12404 true Chr5: 767021-779424 Arabidopsis thaliana
AT5G03260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 767021-777020 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367508 5261 Brassicaceae View MSA
123835573 5264 Brassicales-Malvales View MSA
124350795 5266 SBM View MSA
124249575 5268 Malvidae View MSA
124072546 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.488        
cufflinks 5.093        
cufflinks 2.965        
cufflinks 7.425        
cufflinks 2.169       Low
cufflinks 18.742       High

0 Strain