Gene : AT5G03320 A. thaliana TAIR10
Defline:  (1 of 2) PTHR27001//PTHR27001:SF29 - FAMILY NOT NAMED // PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  243
Name:  ? AT5G03320 Secondary Identifier:  ? PAC:19671217
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03320 0.5kb upstream 0.5kb upstream 2872 true Chr5: 801527-804398 Arabidopsis thaliana
AT5G03320 0.5kb upstream 0.5kb upstream 500 false Chr5: 801527-802026 Arabidopsis thaliana
AT5G03320 0.5kb downstream 0.5kb downstream 2872 true Chr5: 802027-804898 Arabidopsis thaliana
AT5G03320 0.5kb downstream 0.5kb downstream 500 false Chr5: 804399-804898 Arabidopsis thaliana
AT5G03320 1.0kb upstream 1.0kb upstream 3372 true Chr5: 801027-804398 Arabidopsis thaliana
AT5G03320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 801027-802026 Arabidopsis thaliana
AT5G03320 1.0kb downstream 1.0kb downstream 3372 true Chr5: 802027-805398 Arabidopsis thaliana
AT5G03320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 804399-805398 Arabidopsis thaliana
AT5G03320 2.0kb upstream 2.0kb upstream 4372 true Chr5: 800027-804398 Arabidopsis thaliana
AT5G03320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 800027-802026 Arabidopsis thaliana
AT5G03320 2.0kb downstream 2.0kb downstream 4372 true Chr5: 802027-806398 Arabidopsis thaliana
AT5G03320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 804399-806398 Arabidopsis thaliana
AT5G03320 5.0kb upstream 5.0kb upstream 7372 true Chr5: 797027-804398 Arabidopsis thaliana
AT5G03320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 797027-802026 Arabidopsis thaliana
AT5G03320 5.0kb downstream 5.0kb downstream 7372 true Chr5: 802027-809398 Arabidopsis thaliana
AT5G03320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 804399-809398 Arabidopsis thaliana
AT5G03320 10.0kb upstream 10.0kb upstream 12372 true Chr5: 792027-804398 Arabidopsis thaliana
AT5G03320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 792027-802026 Arabidopsis thaliana
AT5G03320 10.0kb downstream 10.0kb downstream 12372 true Chr5: 802027-814398 Arabidopsis thaliana
AT5G03320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 804399-814398 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368702 5261 Brassicaceae View MSA
123799634 5264 Brassicales-Malvales View MSA
124297134 5266 SBM View MSA
124149100 5268 Malvidae View MSA
123874974 5270 Rosid View MSA
123752129 5271 Pentapetalae View MSA
122792935 5272 Eudicot View MSA
122046245 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350468 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.866        
cufflinks 19.347        
cufflinks 9.108       Low
cufflinks 19.022        
cufflinks 10.368       Low
cufflinks 21.588       High

0 Strain