Gene : RHL2 A. thaliana TAIR10
Primary Identifier:  ? AT5G02820 Defline:  (1 of 1) PTHR10848:SF0 - MEIOTIC RECOMBINATION PROTEIN SPO11
Genomic Order:  192 Name:  ? AT5G02820
Secondary Identifier:  ? PAC:19668212
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02820 0.5kb upstream 0.5kb upstream 2337 true Chr5: 642058-644394 Arabidopsis thaliana
AT5G02820 0.5kb upstream 0.5kb upstream 500 false Chr5: 642058-642557 Arabidopsis thaliana
AT5G02820 0.5kb downstream 0.5kb downstream 2337 true Chr5: 642558-644894 Arabidopsis thaliana
AT5G02820 0.5kb downstream 0.5kb downstream 500 false Chr5: 644395-644894 Arabidopsis thaliana
AT5G02820 1.0kb upstream 1.0kb upstream 2837 true Chr5: 641558-644394 Arabidopsis thaliana
AT5G02820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 641558-642557 Arabidopsis thaliana
AT5G02820 1.0kb downstream 1.0kb downstream 2837 true Chr5: 642558-645394 Arabidopsis thaliana
AT5G02820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 644395-645394 Arabidopsis thaliana
AT5G02820 2.0kb upstream 2.0kb upstream 3837 true Chr5: 640558-644394 Arabidopsis thaliana
AT5G02820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 640558-642557 Arabidopsis thaliana
AT5G02820 2.0kb downstream 2.0kb downstream 3837 true Chr5: 642558-646394 Arabidopsis thaliana
AT5G02820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 644395-646394 Arabidopsis thaliana
AT5G02820 5.0kb upstream 5.0kb upstream 6837 true Chr5: 637558-644394 Arabidopsis thaliana
AT5G02820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 637558-642557 Arabidopsis thaliana
AT5G02820 5.0kb downstream 5.0kb downstream 6837 true Chr5: 642558-649394 Arabidopsis thaliana
AT5G02820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 644395-649394 Arabidopsis thaliana
AT5G02820 10.0kb upstream 10.0kb upstream 11837 true Chr5: 632558-644394 Arabidopsis thaliana
AT5G02820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 632558-642557 Arabidopsis thaliana
AT5G02820 10.0kb downstream 10.0kb downstream 11837 true Chr5: 642558-654394 Arabidopsis thaliana
AT5G02820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 644395-654394 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363196 5261 Brassicaceae View MSA
123830310 5264 Brassicales-Malvales View MSA
124339015 5266 SBM View MSA
124241532 5268 Malvidae View MSA
124068832 5270 Rosid View MSA
123738269 5271 Pentapetalae View MSA
122790268 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.041        
cufflinks 11.686        
cufflinks 5.545       Low
cufflinks 12.141        
cufflinks 6.274        
cufflinks 11.881        

0 Strain