Gene : AT5G02450 A. thaliana TAIR10
Defline:  (1 of 3) K02920 - large subunit ribosomal protein L36e (RP-L36e, RPL36) Genomic Order:  153
Name:  ? AT5G02450 Secondary Identifier:  ? PAC:19672296
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02450 0.5kb upstream 0.5kb upstream 2051 true Chr5: 532606-534656 Arabidopsis thaliana
AT5G02450 0.5kb upstream 0.5kb upstream 500 false Chr5: 532606-533105 Arabidopsis thaliana
AT5G02450 0.5kb downstream 0.5kb downstream 2051 true Chr5: 533106-535156 Arabidopsis thaliana
AT5G02450 0.5kb downstream 0.5kb downstream 500 false Chr5: 534657-535156 Arabidopsis thaliana
AT5G02450 1.0kb upstream 1.0kb upstream 2551 true Chr5: 532106-534656 Arabidopsis thaliana
AT5G02450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 532106-533105 Arabidopsis thaliana
AT5G02450 1.0kb downstream 1.0kb downstream 2551 true Chr5: 533106-535656 Arabidopsis thaliana
AT5G02450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 534657-535656 Arabidopsis thaliana
AT5G02450 2.0kb upstream 2.0kb upstream 3551 true Chr5: 531106-534656 Arabidopsis thaliana
AT5G02450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 531106-533105 Arabidopsis thaliana
AT5G02450 2.0kb downstream 2.0kb downstream 3551 true Chr5: 533106-536656 Arabidopsis thaliana
AT5G02450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 534657-536656 Arabidopsis thaliana
AT5G02450 5.0kb upstream 5.0kb upstream 6551 true Chr5: 528106-534656 Arabidopsis thaliana
AT5G02450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 528106-533105 Arabidopsis thaliana
AT5G02450 5.0kb downstream 5.0kb downstream 6551 true Chr5: 533106-539656 Arabidopsis thaliana
AT5G02450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 534657-539656 Arabidopsis thaliana
AT5G02450 10.0kb upstream 10.0kb upstream 11551 true Chr5: 523106-534656 Arabidopsis thaliana
AT5G02450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 523106-533105 Arabidopsis thaliana
AT5G02450 10.0kb downstream 10.0kb downstream 11551 true Chr5: 533106-544656 Arabidopsis thaliana
AT5G02450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 534657-544656 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338204 5261 Brassicaceae View MSA
123778814 5264 Brassicales-Malvales View MSA
124350395 5266 SBM View MSA
124242762 5268 Malvidae View MSA
124066905 5270 Rosid View MSA
123747585 5271 Pentapetalae View MSA
122796759 5272 Eudicot View MSA
122049276 5273 Angiosperm View MSA
121349373 5274 Embryophyte View MSA
123424507 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.417     High  
cufflinks 112.296     High  
cufflinks 81.504     High  
cufflinks 104.921     High  
cufflinks 57.291     High Low
cufflinks 119.409     High High

0 Strain