Gene : AT5G02280 A. thaliana TAIR10
Defline:  (1 of 1) KOG3369 - Transport protein particle (TRAPP) complex subunit Genomic Order:  137
Name:  ? AT5G02280 Secondary Identifier:  ? PAC:19673165
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02280 0.5kb upstream 0.5kb upstream 1488 true Chr5: 468798-470285 Arabidopsis thaliana
AT5G02280 0.5kb upstream 0.5kb upstream 500 false Chr5: 468798-469297 Arabidopsis thaliana
AT5G02280 0.5kb downstream 0.5kb downstream 1488 true Chr5: 469298-470785 Arabidopsis thaliana
AT5G02280 0.5kb downstream 0.5kb downstream 500 false Chr5: 470286-470785 Arabidopsis thaliana
AT5G02280 1.0kb upstream 1.0kb upstream 1988 true Chr5: 468298-470285 Arabidopsis thaliana
AT5G02280 1.0kb upstream 1.0kb upstream 1000 false Chr5: 468298-469297 Arabidopsis thaliana
AT5G02280 1.0kb downstream 1.0kb downstream 1988 true Chr5: 469298-471285 Arabidopsis thaliana
AT5G02280 1.0kb downstream 1.0kb downstream 1000 false Chr5: 470286-471285 Arabidopsis thaliana
AT5G02280 2.0kb upstream 2.0kb upstream 2988 true Chr5: 467298-470285 Arabidopsis thaliana
AT5G02280 2.0kb upstream 2.0kb upstream 2000 false Chr5: 467298-469297 Arabidopsis thaliana
AT5G02280 2.0kb downstream 2.0kb downstream 2988 true Chr5: 469298-472285 Arabidopsis thaliana
AT5G02280 2.0kb downstream 2.0kb downstream 2000 false Chr5: 470286-472285 Arabidopsis thaliana
AT5G02280 5.0kb upstream 5.0kb upstream 5988 true Chr5: 464298-470285 Arabidopsis thaliana
AT5G02280 5.0kb upstream 5.0kb upstream 5000 false Chr5: 464298-469297 Arabidopsis thaliana
AT5G02280 5.0kb downstream 5.0kb downstream 5988 true Chr5: 469298-475285 Arabidopsis thaliana
AT5G02280 5.0kb downstream 5.0kb downstream 5000 false Chr5: 470286-475285 Arabidopsis thaliana
AT5G02280 10.0kb upstream 10.0kb upstream 10988 true Chr5: 459298-470285 Arabidopsis thaliana
AT5G02280 10.0kb upstream 10.0kb upstream 10000 false Chr5: 459298-469297 Arabidopsis thaliana
AT5G02280 10.0kb downstream 10.0kb downstream 10988 true Chr5: 469298-480285 Arabidopsis thaliana
AT5G02280 10.0kb downstream 10.0kb downstream 10000 false Chr5: 470286-480285 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380042 5261 Brassicaceae View MSA
123838369 5264 Brassicales-Malvales View MSA
124341879 5266 SBM View MSA
124237791 5268 Malvidae View MSA
124062773 5270 Rosid View MSA
123740967 5271 Pentapetalae View MSA
122786625 5272 Eudicot View MSA
122043161 5273 Angiosperm View MSA
121347078 5274 Embryophyte View MSA
123424121 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.488       Low
cufflinks 11.211        
cufflinks 6.225        
cufflinks 12.164        
cufflinks 6.57        
cufflinks 12.109        

0 Strain