Gene : AT5G02170 A. thaliana TAIR10
Defline:  (1 of 6) K15015 - solute carrier family 32 (vesicular inhibitory amino acid transporter) (SLC32A, VGAT) Genomic Order:  126
Name:  ? AT5G02170 Secondary Identifier:  ? PAC:19671578
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02170 0.5kb upstream 0.5kb upstream 3363 true Chr5: 427333-430695 Arabidopsis thaliana
AT5G02170 0.5kb upstream 0.5kb upstream 500 false Chr5: 427333-427832 Arabidopsis thaliana
AT5G02170 0.5kb downstream 0.5kb downstream 3363 true Chr5: 427833-431195 Arabidopsis thaliana
AT5G02170 0.5kb downstream 0.5kb downstream 500 false Chr5: 430696-431195 Arabidopsis thaliana
AT5G02170 1.0kb upstream 1.0kb upstream 3863 true Chr5: 426833-430695 Arabidopsis thaliana
AT5G02170 1.0kb upstream 1.0kb upstream 1000 false Chr5: 426833-427832 Arabidopsis thaliana
AT5G02170 1.0kb downstream 1.0kb downstream 3863 true Chr5: 427833-431695 Arabidopsis thaliana
AT5G02170 1.0kb downstream 1.0kb downstream 1000 false Chr5: 430696-431695 Arabidopsis thaliana
AT5G02170 2.0kb upstream 2.0kb upstream 4863 true Chr5: 425833-430695 Arabidopsis thaliana
AT5G02170 2.0kb upstream 2.0kb upstream 2000 false Chr5: 425833-427832 Arabidopsis thaliana
AT5G02170 2.0kb downstream 2.0kb downstream 4863 true Chr5: 427833-432695 Arabidopsis thaliana
AT5G02170 2.0kb downstream 2.0kb downstream 2000 false Chr5: 430696-432695 Arabidopsis thaliana
AT5G02170 5.0kb upstream 5.0kb upstream 7863 true Chr5: 422833-430695 Arabidopsis thaliana
AT5G02170 5.0kb upstream 5.0kb upstream 5000 false Chr5: 422833-427832 Arabidopsis thaliana
AT5G02170 5.0kb downstream 5.0kb downstream 7863 true Chr5: 427833-435695 Arabidopsis thaliana
AT5G02170 5.0kb downstream 5.0kb downstream 5000 false Chr5: 430696-435695 Arabidopsis thaliana
AT5G02170 10.0kb upstream 10.0kb upstream 12863 true Chr5: 417833-430695 Arabidopsis thaliana
AT5G02170 10.0kb upstream 10.0kb upstream 10000 false Chr5: 417833-427832 Arabidopsis thaliana
AT5G02170 10.0kb downstream 10.0kb downstream 12863 true Chr5: 427833-440695 Arabidopsis thaliana
AT5G02170 10.0kb downstream 10.0kb downstream 10000 false Chr5: 430696-440695 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365407 5261 Brassicaceae View MSA
123798948 5264 Brassicales-Malvales View MSA
124296520 5266 SBM View MSA
124250275 5268 Malvidae View MSA
124050270 5270 Rosid View MSA
123752113 5271 Pentapetalae View MSA
122789589 5272 Eudicot View MSA
122050911 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.118     Low  
cufflinks 0.665        
cufflinks 0.09     Low  
cufflinks 1.235        
cufflinks 0.034     Low Low
cufflinks 1.793       High

0 Strain