Gene : AT5G02180 A. thaliana TAIR10
Defline:  (1 of 6) K15015 - solute carrier family 32 (vesicular inhibitory amino acid transporter) (SLC32A, VGAT) Genomic Order:  127
Name:  ? AT5G02180 Secondary Identifier:  ? PAC:19669771
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02180 0.5kb upstream 0.5kb upstream 3365 true Chr5: 430377-433741 Arabidopsis thaliana
AT5G02180 0.5kb upstream 0.5kb upstream 500 false Chr5: 430377-430876 Arabidopsis thaliana
AT5G02180 0.5kb downstream 0.5kb downstream 3365 true Chr5: 430877-434241 Arabidopsis thaliana
AT5G02180 0.5kb downstream 0.5kb downstream 500 false Chr5: 433742-434241 Arabidopsis thaliana
AT5G02180 1.0kb upstream 1.0kb upstream 3865 true Chr5: 429877-433741 Arabidopsis thaliana
AT5G02180 1.0kb upstream 1.0kb upstream 1000 false Chr5: 429877-430876 Arabidopsis thaliana
AT5G02180 1.0kb downstream 1.0kb downstream 3865 true Chr5: 430877-434741 Arabidopsis thaliana
AT5G02180 1.0kb downstream 1.0kb downstream 1000 false Chr5: 433742-434741 Arabidopsis thaliana
AT5G02180 2.0kb upstream 2.0kb upstream 4865 true Chr5: 428877-433741 Arabidopsis thaliana
AT5G02180 2.0kb upstream 2.0kb upstream 2000 false Chr5: 428877-430876 Arabidopsis thaliana
AT5G02180 2.0kb downstream 2.0kb downstream 4865 true Chr5: 430877-435741 Arabidopsis thaliana
AT5G02180 2.0kb downstream 2.0kb downstream 2000 false Chr5: 433742-435741 Arabidopsis thaliana
AT5G02180 5.0kb upstream 5.0kb upstream 7865 true Chr5: 425877-433741 Arabidopsis thaliana
AT5G02180 5.0kb upstream 5.0kb upstream 5000 false Chr5: 425877-430876 Arabidopsis thaliana
AT5G02180 5.0kb downstream 5.0kb downstream 7865 true Chr5: 430877-438741 Arabidopsis thaliana
AT5G02180 5.0kb downstream 5.0kb downstream 5000 false Chr5: 433742-438741 Arabidopsis thaliana
AT5G02180 10.0kb upstream 10.0kb upstream 12865 true Chr5: 420877-433741 Arabidopsis thaliana
AT5G02180 10.0kb upstream 10.0kb upstream 10000 false Chr5: 420877-430876 Arabidopsis thaliana
AT5G02180 10.0kb downstream 10.0kb downstream 12865 true Chr5: 430877-443741 Arabidopsis thaliana
AT5G02180 10.0kb downstream 10.0kb downstream 10000 false Chr5: 433742-443741 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367868 5261 Brassicaceae View MSA
123834064 5264 Brassicales-Malvales View MSA
124344861 5266 SBM View MSA
124250275 5268 Malvidae View MSA
124050270 5270 Rosid View MSA
123752113 5271 Pentapetalae View MSA
122789589 5272 Eudicot View MSA
122050911 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.988        
cufflinks 0.221     Low Low
cufflinks 2.983        
cufflinks 0.697        
cufflinks 4.22       High
cufflinks 0.505        

0 Strain