Gene : RPL A. thaliana TAIR10
Primary Identifier:  ? AT5G02030 Defline:  (1 of 2) PTHR11850//PTHR11850:SF82 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 8-RELATED
Genomic Order:  112 Name:  ? AT5G02030
Secondary Identifier:  ? PAC:19671289
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02030 0.5kb upstream 0.5kb upstream 3908 true Chr5: 395134-399041 Arabidopsis thaliana
AT5G02030 0.5kb upstream 0.5kb upstream 500 false Chr5: 395134-395633 Arabidopsis thaliana
AT5G02030 0.5kb downstream 0.5kb downstream 3908 true Chr5: 395634-399541 Arabidopsis thaliana
AT5G02030 0.5kb downstream 0.5kb downstream 500 false Chr5: 399042-399541 Arabidopsis thaliana
AT5G02030 1.0kb upstream 1.0kb upstream 4408 true Chr5: 394634-399041 Arabidopsis thaliana
AT5G02030 1.0kb upstream 1.0kb upstream 1000 false Chr5: 394634-395633 Arabidopsis thaliana
AT5G02030 1.0kb downstream 1.0kb downstream 4408 true Chr5: 395634-400041 Arabidopsis thaliana
AT5G02030 1.0kb downstream 1.0kb downstream 1000 false Chr5: 399042-400041 Arabidopsis thaliana
AT5G02030 2.0kb upstream 2.0kb upstream 5408 true Chr5: 393634-399041 Arabidopsis thaliana
AT5G02030 2.0kb upstream 2.0kb upstream 2000 false Chr5: 393634-395633 Arabidopsis thaliana
AT5G02030 2.0kb downstream 2.0kb downstream 5408 true Chr5: 395634-401041 Arabidopsis thaliana
AT5G02030 2.0kb downstream 2.0kb downstream 2000 false Chr5: 399042-401041 Arabidopsis thaliana
AT5G02030 5.0kb upstream 5.0kb upstream 8408 true Chr5: 390634-399041 Arabidopsis thaliana
AT5G02030 5.0kb upstream 5.0kb upstream 5000 false Chr5: 390634-395633 Arabidopsis thaliana
AT5G02030 5.0kb downstream 5.0kb downstream 8408 true Chr5: 395634-404041 Arabidopsis thaliana
AT5G02030 5.0kb downstream 5.0kb downstream 5000 false Chr5: 399042-404041 Arabidopsis thaliana
AT5G02030 10.0kb upstream 10.0kb upstream 13408 true Chr5: 385634-399041 Arabidopsis thaliana
AT5G02030 10.0kb upstream 10.0kb upstream 10000 false Chr5: 385634-395633 Arabidopsis thaliana
AT5G02030 10.0kb downstream 10.0kb downstream 13408 true Chr5: 395634-409041 Arabidopsis thaliana
AT5G02030 10.0kb downstream 10.0kb downstream 10000 false Chr5: 399042-409041 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372793 5261 Brassicaceae View MSA
123835577 5264 Brassicales-Malvales View MSA
124350255 5266 SBM View MSA
124247091 5268 Malvidae View MSA
124071866 5270 Rosid View MSA
123748389 5271 Pentapetalae View MSA
122794626 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.829        
cufflinks 3.373        
cufflinks 3.142        
cufflinks 4.108        
cufflinks 4.288        
cufflinks 2.235       Low

0 Strain