Gene : AT5G01930 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31451:SF17 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 6 Genomic Order:  101
Name:  ? AT5G01930 Secondary Identifier:  ? PAC:19670524
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01930 0.5kb upstream 0.5kb upstream 2321 true Chr5: 361081-363401 Arabidopsis thaliana
AT5G01930 0.5kb upstream 0.5kb upstream 500 false Chr5: 362902-363401 Arabidopsis thaliana
AT5G01930 0.5kb downstream 0.5kb downstream 2321 true Chr5: 360581-362901 Arabidopsis thaliana
AT5G01930 0.5kb downstream 0.5kb downstream 500 false Chr5: 360581-361080 Arabidopsis thaliana
AT5G01930 1.0kb upstream 1.0kb upstream 2821 true Chr5: 361081-363901 Arabidopsis thaliana
AT5G01930 1.0kb upstream 1.0kb upstream 1000 false Chr5: 362902-363901 Arabidopsis thaliana
AT5G01930 1.0kb downstream 1.0kb downstream 2821 true Chr5: 360081-362901 Arabidopsis thaliana
AT5G01930 1.0kb downstream 1.0kb downstream 1000 false Chr5: 360081-361080 Arabidopsis thaliana
AT5G01930 2.0kb upstream 2.0kb upstream 3821 true Chr5: 361081-364901 Arabidopsis thaliana
AT5G01930 2.0kb upstream 2.0kb upstream 2000 false Chr5: 362902-364901 Arabidopsis thaliana
AT5G01930 2.0kb downstream 2.0kb downstream 3821 true Chr5: 359081-362901 Arabidopsis thaliana
AT5G01930 2.0kb downstream 2.0kb downstream 2000 false Chr5: 359081-361080 Arabidopsis thaliana
AT5G01930 5.0kb upstream 5.0kb upstream 6821 true Chr5: 361081-367901 Arabidopsis thaliana
AT5G01930 5.0kb upstream 5.0kb upstream 5000 false Chr5: 362902-367901 Arabidopsis thaliana
AT5G01930 5.0kb downstream 5.0kb downstream 6821 true Chr5: 356081-362901 Arabidopsis thaliana
AT5G01930 5.0kb downstream 5.0kb downstream 5000 false Chr5: 356081-361080 Arabidopsis thaliana
AT5G01930 10.0kb upstream 10.0kb upstream 11821 true Chr5: 361081-372901 Arabidopsis thaliana
AT5G01930 10.0kb upstream 10.0kb upstream 10000 false Chr5: 362902-372901 Arabidopsis thaliana
AT5G01930 10.0kb downstream 10.0kb downstream 11821 true Chr5: 351081-362901 Arabidopsis thaliana
AT5G01930 10.0kb downstream 10.0kb downstream 10000 false Chr5: 351081-361080 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372257 5261 Brassicaceae View MSA
123828479 5264 Brassicales-Malvales View MSA
124341762 5266 SBM View MSA
124245046 5268 Malvidae View MSA
124070287 5270 Rosid View MSA
123736857 5271 Pentapetalae View MSA
122790316 5272 Eudicot View MSA
122051044 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.401        
cufflinks 5.006        
cufflinks 2.548        
cufflinks 8.222       High
cufflinks 2.414        
cufflinks 8.556       High

0 Strain