Gene : AT5G01950 A. thaliana TAIR10
Defline:  (1 of 4) PTHR27003//PTHR27003:SF36 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT PROTEIN KINASE-LIKE PROTEIN Genomic Order:  103
Name:  ? AT5G01950 Secondary Identifier:  ? PAC:19668330
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01950 0.5kb upstream 0.5kb upstream 5785 true Chr5: 364902-370686 Arabidopsis thaliana
AT5G01950 0.5kb upstream 0.5kb upstream 500 false Chr5: 370187-370686 Arabidopsis thaliana
AT5G01950 0.5kb downstream 0.5kb downstream 5785 true Chr5: 364402-370186 Arabidopsis thaliana
AT5G01950 0.5kb downstream 0.5kb downstream 500 false Chr5: 364402-364901 Arabidopsis thaliana
AT5G01950 1.0kb upstream 1.0kb upstream 6285 true Chr5: 364902-371186 Arabidopsis thaliana
AT5G01950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 370187-371186 Arabidopsis thaliana
AT5G01950 1.0kb downstream 1.0kb downstream 6285 true Chr5: 363902-370186 Arabidopsis thaliana
AT5G01950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 363902-364901 Arabidopsis thaliana
AT5G01950 2.0kb upstream 2.0kb upstream 7285 true Chr5: 364902-372186 Arabidopsis thaliana
AT5G01950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 370187-372186 Arabidopsis thaliana
AT5G01950 2.0kb downstream 2.0kb downstream 7285 true Chr5: 362902-370186 Arabidopsis thaliana
AT5G01950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 362902-364901 Arabidopsis thaliana
AT5G01950 5.0kb upstream 5.0kb upstream 10285 true Chr5: 364902-375186 Arabidopsis thaliana
AT5G01950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 370187-375186 Arabidopsis thaliana
AT5G01950 5.0kb downstream 5.0kb downstream 10285 true Chr5: 359902-370186 Arabidopsis thaliana
AT5G01950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 359902-364901 Arabidopsis thaliana
AT5G01950 10.0kb upstream 10.0kb upstream 15285 true Chr5: 364902-380186 Arabidopsis thaliana
AT5G01950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 370187-380186 Arabidopsis thaliana
AT5G01950 10.0kb downstream 10.0kb downstream 15285 true Chr5: 354902-370186 Arabidopsis thaliana
AT5G01950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 354902-364901 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367843 5261 Brassicaceae View MSA
123838427 5264 Brassicales-Malvales View MSA
124345908 5266 SBM View MSA
124250402 5268 Malvidae View MSA
124062074 5270 Rosid View MSA
123750521 5271 Pentapetalae View MSA
122786028 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.976        
cufflinks 10.97        
cufflinks 7.347       Low
cufflinks 11.397       High
cufflinks 8.46        
cufflinks 10.195        

0 Strain