Gene : AT5G05510 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14030//PTHR14030:SF2 - MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 // SUBFAMILY NOT NAMED Genomic Order:  478
Name:  ? AT5G05510 Secondary Identifier:  ? PAC:19668799
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05510 0.5kb upstream 0.5kb upstream 2540 true Chr5: 1630559-1633098 Arabidopsis thaliana
AT5G05510 0.5kb upstream 0.5kb upstream 500 false Chr5: 1632599-1633098 Arabidopsis thaliana
AT5G05510 0.5kb downstream 0.5kb downstream 2540 true Chr5: 1630059-1632598 Arabidopsis thaliana
AT5G05510 0.5kb downstream 0.5kb downstream 500 false Chr5: 1630059-1630558 Arabidopsis thaliana
AT5G05510 1.0kb upstream 1.0kb upstream 3040 true Chr5: 1630559-1633598 Arabidopsis thaliana
AT5G05510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1632599-1633598 Arabidopsis thaliana
AT5G05510 1.0kb downstream 1.0kb downstream 3040 true Chr5: 1629559-1632598 Arabidopsis thaliana
AT5G05510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1629559-1630558 Arabidopsis thaliana
AT5G05510 2.0kb upstream 2.0kb upstream 4040 true Chr5: 1630559-1634598 Arabidopsis thaliana
AT5G05510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1632599-1634598 Arabidopsis thaliana
AT5G05510 2.0kb downstream 2.0kb downstream 4040 true Chr5: 1628559-1632598 Arabidopsis thaliana
AT5G05510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1628559-1630558 Arabidopsis thaliana
AT5G05510 5.0kb upstream 5.0kb upstream 7040 true Chr5: 1630559-1637598 Arabidopsis thaliana
AT5G05510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1632599-1637598 Arabidopsis thaliana
AT5G05510 5.0kb downstream 5.0kb downstream 7040 true Chr5: 1625559-1632598 Arabidopsis thaliana
AT5G05510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1625559-1630558 Arabidopsis thaliana
AT5G05510 10.0kb upstream 10.0kb upstream 12040 true Chr5: 1630559-1642598 Arabidopsis thaliana
AT5G05510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1632599-1642598 Arabidopsis thaliana
AT5G05510 10.0kb downstream 10.0kb downstream 12040 true Chr5: 1620559-1632598 Arabidopsis thaliana
AT5G05510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1620559-1630558 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040950 5273 Angiosperm View MSA
122370393 5261 Brassicaceae View MSA
123830973 5264 Brassicales-Malvales View MSA
124346717 5266 SBM View MSA
124244326 5268 Malvidae View MSA
124070685 5270 Rosid View MSA
123736871 5271 Pentapetalae View MSA
122786848 5272 Eudicot View MSA
121350124 5274 Embryophyte View MSA
123427088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.885        
cufflinks 3.352        
cufflinks 0.517        
cufflinks 3.284        
cufflinks 0.3       Low
cufflinks 5.385       High

0 Strain