Gene : EIF2 ALPHA A. thaliana TAIR10
Primary Identifier:  ? AT5G05470 Defline:  (1 of 2) K03237 - translation initiation factor 2 subunit 1 (EIF2S1)
Genomic Order:  474 Name:  ? AT5G05470
Secondary Identifier:  ? PAC:19666001
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05470 0.5kb upstream 0.5kb upstream 2383 true Chr5: 1619958-1622340 Arabidopsis thaliana
AT5G05470 0.5kb upstream 0.5kb upstream 500 false Chr5: 1619958-1620457 Arabidopsis thaliana
AT5G05470 0.5kb downstream 0.5kb downstream 2383 true Chr5: 1620458-1622840 Arabidopsis thaliana
AT5G05470 0.5kb downstream 0.5kb downstream 500 false Chr5: 1622341-1622840 Arabidopsis thaliana
AT5G05470 1.0kb upstream 1.0kb upstream 2883 true Chr5: 1619458-1622340 Arabidopsis thaliana
AT5G05470 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1619458-1620457 Arabidopsis thaliana
AT5G05470 1.0kb downstream 1.0kb downstream 2883 true Chr5: 1620458-1623340 Arabidopsis thaliana
AT5G05470 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1622341-1623340 Arabidopsis thaliana
AT5G05470 2.0kb upstream 2.0kb upstream 3883 true Chr5: 1618458-1622340 Arabidopsis thaliana
AT5G05470 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1618458-1620457 Arabidopsis thaliana
AT5G05470 2.0kb downstream 2.0kb downstream 3883 true Chr5: 1620458-1624340 Arabidopsis thaliana
AT5G05470 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1622341-1624340 Arabidopsis thaliana
AT5G05470 5.0kb upstream 5.0kb upstream 6883 true Chr5: 1615458-1622340 Arabidopsis thaliana
AT5G05470 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1615458-1620457 Arabidopsis thaliana
AT5G05470 5.0kb downstream 5.0kb downstream 6883 true Chr5: 1620458-1627340 Arabidopsis thaliana
AT5G05470 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1622341-1627340 Arabidopsis thaliana
AT5G05470 10.0kb upstream 10.0kb upstream 11883 true Chr5: 1610458-1622340 Arabidopsis thaliana
AT5G05470 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1610458-1620457 Arabidopsis thaliana
AT5G05470 10.0kb downstream 10.0kb downstream 11883 true Chr5: 1620458-1632340 Arabidopsis thaliana
AT5G05470 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1622341-1632340 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338176 5261 Brassicaceae View MSA
123778787 5264 Brassicales-Malvales View MSA
124277126 5266 SBM View MSA
124132356 5268 Malvidae View MSA
124064175 5270 Rosid View MSA
123738258 5271 Pentapetalae View MSA
122788927 5272 Eudicot View MSA
122043583 5273 Angiosperm View MSA
121345071 5274 Embryophyte View MSA
123424758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.427        
cufflinks 12.405        
cufflinks 9.745        
cufflinks 12.958        
cufflinks 8.481       Low
cufflinks 13.286       High

0 Strain