Gene : AT5G05350 A. thaliana TAIR10
Defline:  (1 of 2) PF11204 - Protein of unknown function (DUF2985) (DUF2985) Genomic Order:  461
Name:  ? AT5G05350 Secondary Identifier:  ? PAC:19668391
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05350 0.5kb upstream 0.5kb upstream 2721 true Chr5: 1584797-1587517 Arabidopsis thaliana
AT5G05350 0.5kb upstream 0.5kb upstream 500 false Chr5: 1584797-1585296 Arabidopsis thaliana
AT5G05350 0.5kb downstream 0.5kb downstream 2721 true Chr5: 1585297-1588017 Arabidopsis thaliana
AT5G05350 0.5kb downstream 0.5kb downstream 500 false Chr5: 1587518-1588017 Arabidopsis thaliana
AT5G05350 1.0kb upstream 1.0kb upstream 3221 true Chr5: 1584297-1587517 Arabidopsis thaliana
AT5G05350 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1584297-1585296 Arabidopsis thaliana
AT5G05350 1.0kb downstream 1.0kb downstream 3221 true Chr5: 1585297-1588517 Arabidopsis thaliana
AT5G05350 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1587518-1588517 Arabidopsis thaliana
AT5G05350 2.0kb upstream 2.0kb upstream 4221 true Chr5: 1583297-1587517 Arabidopsis thaliana
AT5G05350 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1583297-1585296 Arabidopsis thaliana
AT5G05350 2.0kb downstream 2.0kb downstream 4221 true Chr5: 1585297-1589517 Arabidopsis thaliana
AT5G05350 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1587518-1589517 Arabidopsis thaliana
AT5G05350 5.0kb upstream 5.0kb upstream 7221 true Chr5: 1580297-1587517 Arabidopsis thaliana
AT5G05350 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1580297-1585296 Arabidopsis thaliana
AT5G05350 5.0kb downstream 5.0kb downstream 7221 true Chr5: 1585297-1592517 Arabidopsis thaliana
AT5G05350 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1587518-1592517 Arabidopsis thaliana
AT5G05350 10.0kb upstream 10.0kb upstream 12221 true Chr5: 1575297-1587517 Arabidopsis thaliana
AT5G05350 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1575297-1585296 Arabidopsis thaliana
AT5G05350 10.0kb downstream 10.0kb downstream 12221 true Chr5: 1585297-1597517 Arabidopsis thaliana
AT5G05350 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1587518-1597517 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381538 5261 Brassicaceae View MSA
123834088 5264 Brassicales-Malvales View MSA
124343175 5266 SBM View MSA
124239250 5268 Malvidae View MSA
124061942 5270 Rosid View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.457       Low
cufflinks 3.951       High
cufflinks 0.649        
cufflinks 2.681        
cufflinks 0.546        
cufflinks 2.852        

0 Strain