Gene : CEV1 A. thaliana TAIR10
Primary Identifier:  ? AT5G05170 Defline:  (1 of 1) PTHR13301//PTHR13301:SF64 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  442 Name:  ? AT5G05170
Secondary Identifier:  ? PAC:19670881
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1001 Arabidopsis thaliana pathologic  

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05170 0.5kb upstream 0.5kb upstream 5741 true Chr5: 1530174-1535914 Arabidopsis thaliana
AT5G05170 0.5kb upstream 0.5kb upstream 500 false Chr5: 1535415-1535914 Arabidopsis thaliana
AT5G05170 0.5kb downstream 0.5kb downstream 5741 true Chr5: 1529674-1535414 Arabidopsis thaliana
AT5G05170 0.5kb downstream 0.5kb downstream 500 false Chr5: 1529674-1530173 Arabidopsis thaliana
AT5G05170 1.0kb upstream 1.0kb upstream 6241 true Chr5: 1530174-1536414 Arabidopsis thaliana
AT5G05170 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1535415-1536414 Arabidopsis thaliana
AT5G05170 1.0kb downstream 1.0kb downstream 6241 true Chr5: 1529174-1535414 Arabidopsis thaliana
AT5G05170 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1529174-1530173 Arabidopsis thaliana
AT5G05170 2.0kb upstream 2.0kb upstream 7241 true Chr5: 1530174-1537414 Arabidopsis thaliana
AT5G05170 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1535415-1537414 Arabidopsis thaliana
AT5G05170 2.0kb downstream 2.0kb downstream 7241 true Chr5: 1528174-1535414 Arabidopsis thaliana
AT5G05170 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1528174-1530173 Arabidopsis thaliana
AT5G05170 5.0kb upstream 5.0kb upstream 10241 true Chr5: 1530174-1540414 Arabidopsis thaliana
AT5G05170 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1535415-1540414 Arabidopsis thaliana
AT5G05170 5.0kb downstream 5.0kb downstream 10241 true Chr5: 1525174-1535414 Arabidopsis thaliana
AT5G05170 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1525174-1530173 Arabidopsis thaliana
AT5G05170 10.0kb upstream 10.0kb upstream 15241 true Chr5: 1530174-1545414 Arabidopsis thaliana
AT5G05170 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1535415-1545414 Arabidopsis thaliana
AT5G05170 10.0kb downstream 10.0kb downstream 15241 true Chr5: 1520174-1535414 Arabidopsis thaliana
AT5G05170 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1520174-1530173 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366565 5261 Brassicaceae View MSA
123829715 5264 Brassicales-Malvales View MSA
124350218 5266 SBM View MSA
124240162 5268 Malvidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 114.876     High  
cufflinks 171.773     High  
cufflinks 84.127     High Low
cufflinks 176.366     High  
cufflinks 90.663     High Low
cufflinks 208.411     High High

0 Strain