Gene : AT5G05100 A. thaliana TAIR10
Defline:  (1 of 4) PTHR15672//PTHR15672:SF15 - CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN // EXPRESSED PROTEIN Genomic Order:  434
Name:  ? AT5G05100 Secondary Identifier:  ? PAC:19669623
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05100 0.5kb upstream 0.5kb upstream 2603 true Chr5: 1505122-1507724 Arabidopsis thaliana
AT5G05100 0.5kb upstream 0.5kb upstream 500 false Chr5: 1507225-1507724 Arabidopsis thaliana
AT5G05100 0.5kb downstream 0.5kb downstream 2603 true Chr5: 1504622-1507224 Arabidopsis thaliana
AT5G05100 0.5kb downstream 0.5kb downstream 500 false Chr5: 1504622-1505121 Arabidopsis thaliana
AT5G05100 1.0kb upstream 1.0kb upstream 3103 true Chr5: 1505122-1508224 Arabidopsis thaliana
AT5G05100 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1507225-1508224 Arabidopsis thaliana
AT5G05100 1.0kb downstream 1.0kb downstream 3103 true Chr5: 1504122-1507224 Arabidopsis thaliana
AT5G05100 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1504122-1505121 Arabidopsis thaliana
AT5G05100 2.0kb upstream 2.0kb upstream 4103 true Chr5: 1505122-1509224 Arabidopsis thaliana
AT5G05100 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1507225-1509224 Arabidopsis thaliana
AT5G05100 2.0kb downstream 2.0kb downstream 4103 true Chr5: 1503122-1507224 Arabidopsis thaliana
AT5G05100 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1503122-1505121 Arabidopsis thaliana
AT5G05100 5.0kb upstream 5.0kb upstream 7103 true Chr5: 1505122-1512224 Arabidopsis thaliana
AT5G05100 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1507225-1512224 Arabidopsis thaliana
AT5G05100 5.0kb downstream 5.0kb downstream 7103 true Chr5: 1500122-1507224 Arabidopsis thaliana
AT5G05100 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1500122-1505121 Arabidopsis thaliana
AT5G05100 10.0kb upstream 10.0kb upstream 12103 true Chr5: 1505122-1517224 Arabidopsis thaliana
AT5G05100 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1507225-1517224 Arabidopsis thaliana
AT5G05100 10.0kb downstream 10.0kb downstream 12103 true Chr5: 1495122-1507224 Arabidopsis thaliana
AT5G05100 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1495122-1505121 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367747 5261 Brassicaceae View MSA
123799420 5264 Brassicales-Malvales View MSA
124296944 5266 SBM View MSA
124255676 5268 Malvidae View MSA
124041327 5270 Rosid View MSA
123753124 5271 Pentapetalae View MSA
122794713 5272 Eudicot View MSA
122048574 5273 Angiosperm View MSA
123428874 5275 Viridiplantae View MSA
121347562 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.467     High  
cufflinks 33.855     High  
cufflinks 20.523       Low
cufflinks 39.746     High High
cufflinks 26.389     High  
cufflinks 31.098     High  

0 Strain