Gene : NAS1 A. thaliana TAIR10
Primary Identifier:  ? AT5G04950 Defline:  (1 of 4) K05953 - nicotianamine synthase (E2.5.1.43)
Genomic Order:  419 Name:  ? AT5G04950
Secondary Identifier:  ? PAC:19665277
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5957 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04950 0.5kb upstream 0.5kb upstream 1746 true Chr5: 1457645-1459390 Arabidopsis thaliana
AT5G04950 0.5kb upstream 0.5kb upstream 500 false Chr5: 1458891-1459390 Arabidopsis thaliana
AT5G04950 0.5kb downstream 0.5kb downstream 1746 true Chr5: 1457145-1458890 Arabidopsis thaliana
AT5G04950 0.5kb downstream 0.5kb downstream 500 false Chr5: 1457145-1457644 Arabidopsis thaliana
AT5G04950 1.0kb upstream 1.0kb upstream 2246 true Chr5: 1457645-1459890 Arabidopsis thaliana
AT5G04950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1458891-1459890 Arabidopsis thaliana
AT5G04950 1.0kb downstream 1.0kb downstream 2246 true Chr5: 1456645-1458890 Arabidopsis thaliana
AT5G04950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1456645-1457644 Arabidopsis thaliana
AT5G04950 2.0kb upstream 2.0kb upstream 3246 true Chr5: 1457645-1460890 Arabidopsis thaliana
AT5G04950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1458891-1460890 Arabidopsis thaliana
AT5G04950 2.0kb downstream 2.0kb downstream 3246 true Chr5: 1455645-1458890 Arabidopsis thaliana
AT5G04950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1455645-1457644 Arabidopsis thaliana
AT5G04950 5.0kb upstream 5.0kb upstream 6246 true Chr5: 1457645-1463890 Arabidopsis thaliana
AT5G04950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1458891-1463890 Arabidopsis thaliana
AT5G04950 5.0kb downstream 5.0kb downstream 6246 true Chr5: 1452645-1458890 Arabidopsis thaliana
AT5G04950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1452645-1457644 Arabidopsis thaliana
AT5G04950 10.0kb upstream 10.0kb upstream 11246 true Chr5: 1457645-1468890 Arabidopsis thaliana
AT5G04950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1458891-1468890 Arabidopsis thaliana
AT5G04950 10.0kb downstream 10.0kb downstream 11246 true Chr5: 1447645-1458890 Arabidopsis thaliana
AT5G04950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1447645-1457644 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366034 5261 Brassicaceae View MSA
123799093 5264 Brassicales-Malvales View MSA
124296648 5266 SBM View MSA
124148739 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.758        
cufflinks 1.944        
cufflinks 0.094     Low Low
cufflinks 5.894        
cufflinks 0.048     Low Low
cufflinks 6.069        

0 Strain