Gene : SUN1 A. thaliana TAIR10
Primary Identifier:  ? AT5G04990 Defline:  (1 of 2) K19347 - SUN domain-containing protein 1/2 (SUN1_2)
Genomic Order:  423 Name:  ? AT5G04990
Secondary Identifier:  ? PAC:19671498
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04990 0.5kb upstream 0.5kb upstream 2984 true Chr5: 1471481-1474464 Arabidopsis thaliana
AT5G04990 0.5kb upstream 0.5kb upstream 500 false Chr5: 1473965-1474464 Arabidopsis thaliana
AT5G04990 0.5kb downstream 0.5kb downstream 2984 true Chr5: 1470981-1473964 Arabidopsis thaliana
AT5G04990 0.5kb downstream 0.5kb downstream 500 false Chr5: 1470981-1471480 Arabidopsis thaliana
AT5G04990 1.0kb upstream 1.0kb upstream 3484 true Chr5: 1471481-1474964 Arabidopsis thaliana
AT5G04990 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1473965-1474964 Arabidopsis thaliana
AT5G04990 1.0kb downstream 1.0kb downstream 3484 true Chr5: 1470481-1473964 Arabidopsis thaliana
AT5G04990 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1470481-1471480 Arabidopsis thaliana
AT5G04990 2.0kb upstream 2.0kb upstream 4484 true Chr5: 1471481-1475964 Arabidopsis thaliana
AT5G04990 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1473965-1475964 Arabidopsis thaliana
AT5G04990 2.0kb downstream 2.0kb downstream 4484 true Chr5: 1469481-1473964 Arabidopsis thaliana
AT5G04990 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1469481-1471480 Arabidopsis thaliana
AT5G04990 5.0kb upstream 5.0kb upstream 7484 true Chr5: 1471481-1478964 Arabidopsis thaliana
AT5G04990 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1473965-1478964 Arabidopsis thaliana
AT5G04990 5.0kb downstream 5.0kb downstream 7484 true Chr5: 1466481-1473964 Arabidopsis thaliana
AT5G04990 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1466481-1471480 Arabidopsis thaliana
AT5G04990 10.0kb upstream 10.0kb upstream 12484 true Chr5: 1471481-1483964 Arabidopsis thaliana
AT5G04990 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1473965-1483964 Arabidopsis thaliana
AT5G04990 10.0kb downstream 10.0kb downstream 12484 true Chr5: 1461481-1473964 Arabidopsis thaliana
AT5G04990 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1461481-1471480 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363185 5261 Brassicaceae View MSA
123835498 5264 Brassicales-Malvales View MSA
124337355 5266 SBM View MSA
124243542 5268 Malvidae View MSA
124064133 5270 Rosid View MSA
123737597 5271 Pentapetalae View MSA
122789122 5272 Eudicot View MSA
122047855 5273 Angiosperm View MSA
121344076 5274 Embryophyte View MSA
123425262 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.711        
cufflinks 15.59        
cufflinks 10.536       Low
cufflinks 15.701        
cufflinks 11.051        
cufflinks 19.225       High

0 Strain