Gene : OFP13 A. thaliana TAIR10
Primary Identifier:  ? AT5G04820 Defline:  (1 of 1) PTHR33057//PTHR33057:SF1 - FAMILY NOT NAMED // OVATE FAMILY PROTEIN 13
Genomic Order:  404 Name:  ? AT5G04820
Secondary Identifier:  ? PAC:19671453
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04820 0.5kb upstream 0.5kb upstream 1666 true Chr5: 1399119-1400784 Arabidopsis thaliana
AT5G04820 0.5kb upstream 0.5kb upstream 500 false Chr5: 1399119-1399618 Arabidopsis thaliana
AT5G04820 0.5kb downstream 0.5kb downstream 1666 true Chr5: 1399619-1401284 Arabidopsis thaliana
AT5G04820 0.5kb downstream 0.5kb downstream 500 false Chr5: 1400785-1401284 Arabidopsis thaliana
AT5G04820 1.0kb upstream 1.0kb upstream 2166 true Chr5: 1398619-1400784 Arabidopsis thaliana
AT5G04820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1398619-1399618 Arabidopsis thaliana
AT5G04820 1.0kb downstream 1.0kb downstream 2166 true Chr5: 1399619-1401784 Arabidopsis thaliana
AT5G04820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1400785-1401784 Arabidopsis thaliana
AT5G04820 2.0kb upstream 2.0kb upstream 3166 true Chr5: 1397619-1400784 Arabidopsis thaliana
AT5G04820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1397619-1399618 Arabidopsis thaliana
AT5G04820 2.0kb downstream 2.0kb downstream 3166 true Chr5: 1399619-1402784 Arabidopsis thaliana
AT5G04820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1400785-1402784 Arabidopsis thaliana
AT5G04820 5.0kb upstream 5.0kb upstream 6166 true Chr5: 1394619-1400784 Arabidopsis thaliana
AT5G04820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1394619-1399618 Arabidopsis thaliana
AT5G04820 5.0kb downstream 5.0kb downstream 6166 true Chr5: 1399619-1405784 Arabidopsis thaliana
AT5G04820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1400785-1405784 Arabidopsis thaliana
AT5G04820 10.0kb upstream 10.0kb upstream 11166 true Chr5: 1389619-1400784 Arabidopsis thaliana
AT5G04820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1389619-1399618 Arabidopsis thaliana
AT5G04820 10.0kb downstream 10.0kb downstream 11166 true Chr5: 1399619-1410784 Arabidopsis thaliana
AT5G04820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1400785-1410784 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363961 5261 Brassicaceae View MSA
123839367 5264 Brassicales-Malvales View MSA
124346323 5266 SBM View MSA
124253627 5268 Malvidae View MSA
124071458 5270 Rosid View MSA
123749654 5271 Pentapetalae View MSA
122787439 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.957       High
cufflinks 1.76       Low
cufflinks 3.057        
cufflinks 2.844        
cufflinks 3.379        
cufflinks 2.56        

0 Strain