Gene : AT5G04700 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24177//PTHR24177:SF32 - FAMILY NOT NAMED // ANKYRIN REPEAT FAMILY PROTEIN Genomic Order:  392
Name:  ? AT5G04700 Secondary Identifier:  ? PAC:19671730
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04700 0.5kb upstream 0.5kb upstream 3015 true Chr5: 1354240-1357254 Arabidopsis thaliana
AT5G04700 0.5kb upstream 0.5kb upstream 500 false Chr5: 1356755-1357254 Arabidopsis thaliana
AT5G04700 0.5kb downstream 0.5kb downstream 3015 true Chr5: 1353740-1356754 Arabidopsis thaliana
AT5G04700 0.5kb downstream 0.5kb downstream 500 false Chr5: 1353740-1354239 Arabidopsis thaliana
AT5G04700 1.0kb upstream 1.0kb upstream 3515 true Chr5: 1354240-1357754 Arabidopsis thaliana
AT5G04700 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1356755-1357754 Arabidopsis thaliana
AT5G04700 1.0kb downstream 1.0kb downstream 3515 true Chr5: 1353240-1356754 Arabidopsis thaliana
AT5G04700 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1353240-1354239 Arabidopsis thaliana
AT5G04700 2.0kb upstream 2.0kb upstream 4515 true Chr5: 1354240-1358754 Arabidopsis thaliana
AT5G04700 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1356755-1358754 Arabidopsis thaliana
AT5G04700 2.0kb downstream 2.0kb downstream 4515 true Chr5: 1352240-1356754 Arabidopsis thaliana
AT5G04700 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1352240-1354239 Arabidopsis thaliana
AT5G04700 5.0kb upstream 5.0kb upstream 7515 true Chr5: 1354240-1361754 Arabidopsis thaliana
AT5G04700 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1356755-1361754 Arabidopsis thaliana
AT5G04700 5.0kb downstream 5.0kb downstream 7515 true Chr5: 1349240-1356754 Arabidopsis thaliana
AT5G04700 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1349240-1354239 Arabidopsis thaliana
AT5G04700 10.0kb upstream 10.0kb upstream 12515 true Chr5: 1354240-1366754 Arabidopsis thaliana
AT5G04700 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1356755-1366754 Arabidopsis thaliana
AT5G04700 10.0kb downstream 10.0kb downstream 12515 true Chr5: 1344240-1356754 Arabidopsis thaliana
AT5G04700 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1344240-1354239 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372346 5261 Brassicaceae View MSA
123800341 5264 Brassicales-Malvales View MSA
124297762 5266 SBM View MSA
124254356 5268 Malvidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.536        
cufflinks 2.391       High
cufflinks 0.341        
cufflinks 1.696        
cufflinks 0.269       Low
cufflinks 2.34        

0 Strain