Gene : KCS19 A. thaliana TAIR10
Primary Identifier:  ? AT5G04530 Defline:  (1 of 3) PTHR31561:SF24 - 3-KETOACYL-COA SYNTHASE 12-RELATED
Genomic Order:  378 Name:  ? AT5G04530
Secondary Identifier:  ? PAC:19670240
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5080 Arabidopsis thaliana pathologic  
Athaliana PWY-6433 Arabidopsis thaliana pathologic  
Athaliana PWY-6598 Arabidopsis thaliana pathologic  
Athaliana PWY-7036 Arabidopsis thaliana pathologic  
Athaliana PWY-7601 Arabidopsis thaliana pathologic  
Athaliana PWY-7619 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04530 0.5kb upstream 0.5kb upstream 2367 true Chr5: 1291822-1294188 Arabidopsis thaliana
AT5G04530 0.5kb upstream 0.5kb upstream 500 false Chr5: 1293689-1294188 Arabidopsis thaliana
AT5G04530 0.5kb downstream 0.5kb downstream 2367 true Chr5: 1291322-1293688 Arabidopsis thaliana
AT5G04530 0.5kb downstream 0.5kb downstream 500 false Chr5: 1291322-1291821 Arabidopsis thaliana
AT5G04530 1.0kb upstream 1.0kb upstream 2867 true Chr5: 1291822-1294688 Arabidopsis thaliana
AT5G04530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1293689-1294688 Arabidopsis thaliana
AT5G04530 1.0kb downstream 1.0kb downstream 2867 true Chr5: 1290822-1293688 Arabidopsis thaliana
AT5G04530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1290822-1291821 Arabidopsis thaliana
AT5G04530 2.0kb upstream 2.0kb upstream 3867 true Chr5: 1291822-1295688 Arabidopsis thaliana
AT5G04530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1293689-1295688 Arabidopsis thaliana
AT5G04530 2.0kb downstream 2.0kb downstream 3867 true Chr5: 1289822-1293688 Arabidopsis thaliana
AT5G04530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1289822-1291821 Arabidopsis thaliana
AT5G04530 5.0kb upstream 5.0kb upstream 6867 true Chr5: 1291822-1298688 Arabidopsis thaliana
AT5G04530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1293689-1298688 Arabidopsis thaliana
AT5G04530 5.0kb downstream 5.0kb downstream 6867 true Chr5: 1286822-1293688 Arabidopsis thaliana
AT5G04530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1286822-1291821 Arabidopsis thaliana
AT5G04530 10.0kb upstream 10.0kb upstream 11867 true Chr5: 1291822-1303688 Arabidopsis thaliana
AT5G04530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1293689-1303688 Arabidopsis thaliana
AT5G04530 10.0kb downstream 10.0kb downstream 11867 true Chr5: 1281822-1293688 Arabidopsis thaliana
AT5G04530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1281822-1291821 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377853 5261 Brassicaceae View MSA
123835129 5264 Brassicales-Malvales View MSA
124340522 5266 SBM View MSA
124254150 5268 Malvidae View MSA
124066808 5270 Rosid View MSA
123741597 5271 Pentapetalae View MSA
122795783 5272 Eudicot View MSA
122043715 5273 Angiosperm View MSA
121310174 5274 Embryophyte View MSA
123347739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.202       High
cufflinks 0.008     Low Low
cufflinks 5.109        
cufflinks 0.02     Low  
cufflinks 3.172        
cufflinks 0.057     Low  

0 Strain