Gene : BIOF A. thaliana TAIR10
Primary Identifier:  ? AT5G04620 Defline:  (1 of 1) 2.3.1.47 - 8-amino-7-oxononanoate synthase / AONS
Genomic Order:  385 Name:  ? AT5G04620
Secondary Identifier:  ? PAC:19670910
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04620 0.5kb upstream 0.5kb upstream 3477 true Chr5: 1326615-1330091 Arabidopsis thaliana
AT5G04620 0.5kb upstream 0.5kb upstream 500 false Chr5: 1326615-1327114 Arabidopsis thaliana
AT5G04620 0.5kb downstream 0.5kb downstream 3477 true Chr5: 1327115-1330591 Arabidopsis thaliana
AT5G04620 0.5kb downstream 0.5kb downstream 500 false Chr5: 1330092-1330591 Arabidopsis thaliana
AT5G04620 1.0kb upstream 1.0kb upstream 3977 true Chr5: 1326115-1330091 Arabidopsis thaliana
AT5G04620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1326115-1327114 Arabidopsis thaliana
AT5G04620 1.0kb downstream 1.0kb downstream 3977 true Chr5: 1327115-1331091 Arabidopsis thaliana
AT5G04620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1330092-1331091 Arabidopsis thaliana
AT5G04620 2.0kb upstream 2.0kb upstream 4977 true Chr5: 1325115-1330091 Arabidopsis thaliana
AT5G04620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1325115-1327114 Arabidopsis thaliana
AT5G04620 2.0kb downstream 2.0kb downstream 4977 true Chr5: 1327115-1332091 Arabidopsis thaliana
AT5G04620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1330092-1332091 Arabidopsis thaliana
AT5G04620 5.0kb upstream 5.0kb upstream 7977 true Chr5: 1322115-1330091 Arabidopsis thaliana
AT5G04620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1322115-1327114 Arabidopsis thaliana
AT5G04620 5.0kb downstream 5.0kb downstream 7977 true Chr5: 1327115-1335091 Arabidopsis thaliana
AT5G04620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1330092-1335091 Arabidopsis thaliana
AT5G04620 10.0kb upstream 10.0kb upstream 12977 true Chr5: 1317115-1330091 Arabidopsis thaliana
AT5G04620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1317115-1327114 Arabidopsis thaliana
AT5G04620 10.0kb downstream 10.0kb downstream 12977 true Chr5: 1327115-1340091 Arabidopsis thaliana
AT5G04620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1330092-1340091 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368840 5261 Brassicaceae View MSA
123827597 5264 Brassicales-Malvales View MSA
124339882 5266 SBM View MSA
124241279 5268 Malvidae View MSA
124063133 5270 Rosid View MSA
123736926 5271 Pentapetalae View MSA
122789406 5272 Eudicot View MSA
122047915 5273 Angiosperm View MSA
121344839 5274 Embryophyte View MSA
123424472 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.852       Low
cufflinks 3.228        
cufflinks 3.102        
cufflinks 3.224        
cufflinks 2.352        
cufflinks 3.387        

0 Strain