Gene : NAC077 A. thaliana TAIR10
Primary Identifier:  ? AT5G04400 Defline:  (1 of 3) PTHR31989:SF29 - F18K10.6 PROTEIN-RELATED
Genomic Order:  366 Name:  ? AT5G04400
Secondary Identifier:  ? PAC:19669293
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04400 0.5kb upstream 0.5kb upstream 2304 true Chr5: 1241055-1243358 Arabidopsis thaliana
AT5G04400 0.5kb upstream 0.5kb upstream 500 false Chr5: 1241055-1241554 Arabidopsis thaliana
AT5G04400 0.5kb downstream 0.5kb downstream 2304 true Chr5: 1241555-1243858 Arabidopsis thaliana
AT5G04400 0.5kb downstream 0.5kb downstream 500 false Chr5: 1243359-1243858 Arabidopsis thaliana
AT5G04400 1.0kb upstream 1.0kb upstream 2804 true Chr5: 1240555-1243358 Arabidopsis thaliana
AT5G04400 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1240555-1241554 Arabidopsis thaliana
AT5G04400 1.0kb downstream 1.0kb downstream 2804 true Chr5: 1241555-1244358 Arabidopsis thaliana
AT5G04400 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1243359-1244358 Arabidopsis thaliana
AT5G04400 2.0kb upstream 2.0kb upstream 3804 true Chr5: 1239555-1243358 Arabidopsis thaliana
AT5G04400 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1239555-1241554 Arabidopsis thaliana
AT5G04400 2.0kb downstream 2.0kb downstream 3804 true Chr5: 1241555-1245358 Arabidopsis thaliana
AT5G04400 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1243359-1245358 Arabidopsis thaliana
AT5G04400 5.0kb upstream 5.0kb upstream 6804 true Chr5: 1236555-1243358 Arabidopsis thaliana
AT5G04400 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1236555-1241554 Arabidopsis thaliana
AT5G04400 5.0kb downstream 5.0kb downstream 6804 true Chr5: 1241555-1248358 Arabidopsis thaliana
AT5G04400 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1243359-1248358 Arabidopsis thaliana
AT5G04400 10.0kb upstream 10.0kb upstream 11804 true Chr5: 1231555-1243358 Arabidopsis thaliana
AT5G04400 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1231555-1241554 Arabidopsis thaliana
AT5G04400 10.0kb downstream 10.0kb downstream 11804 true Chr5: 1241555-1253358 Arabidopsis thaliana
AT5G04400 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1243359-1253358 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381920 5261 Brassicaceae View MSA
123803538 5264 Brassicales-Malvales View MSA
124300638 5266 SBM View MSA
124251197 5268 Malvidae View MSA
124061074 5270 Rosid View MSA
123751964 5271 Pentapetalae View MSA
122797283 5272 Eudicot View MSA
122049961 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.008     Low  

0 Strain