Gene : NAC2 A. thaliana TAIR10
Primary Identifier:  ? AT5G04410 Defline:  (1 of 2) PTHR31989//PTHR31989:SF43 - FAMILY NOT NAMED // NAC DOMAIN CONTAINING PROTEIN 53-RELATED
Genomic Order:  367 Name:  ? AT5G04410
Secondary Identifier:  ? PAC:19671101
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04410 0.5kb upstream 0.5kb upstream 3427 true Chr5: 1243258-1246684 Arabidopsis thaliana
AT5G04410 0.5kb upstream 0.5kb upstream 500 false Chr5: 1243258-1243757 Arabidopsis thaliana
AT5G04410 0.5kb downstream 0.5kb downstream 3427 true Chr5: 1243758-1247184 Arabidopsis thaliana
AT5G04410 0.5kb downstream 0.5kb downstream 500 false Chr5: 1246685-1247184 Arabidopsis thaliana
AT5G04410 1.0kb upstream 1.0kb upstream 3927 true Chr5: 1242758-1246684 Arabidopsis thaliana
AT5G04410 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1242758-1243757 Arabidopsis thaliana
AT5G04410 1.0kb downstream 1.0kb downstream 3927 true Chr5: 1243758-1247684 Arabidopsis thaliana
AT5G04410 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1246685-1247684 Arabidopsis thaliana
AT5G04410 2.0kb upstream 2.0kb upstream 4927 true Chr5: 1241758-1246684 Arabidopsis thaliana
AT5G04410 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1241758-1243757 Arabidopsis thaliana
AT5G04410 2.0kb downstream 2.0kb downstream 4927 true Chr5: 1243758-1248684 Arabidopsis thaliana
AT5G04410 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1246685-1248684 Arabidopsis thaliana
AT5G04410 5.0kb upstream 5.0kb upstream 7927 true Chr5: 1238758-1246684 Arabidopsis thaliana
AT5G04410 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1238758-1243757 Arabidopsis thaliana
AT5G04410 5.0kb downstream 5.0kb downstream 7927 true Chr5: 1243758-1251684 Arabidopsis thaliana
AT5G04410 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1246685-1251684 Arabidopsis thaliana
AT5G04410 10.0kb upstream 10.0kb upstream 12927 true Chr5: 1233758-1246684 Arabidopsis thaliana
AT5G04410 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1233758-1243757 Arabidopsis thaliana
AT5G04410 10.0kb downstream 10.0kb downstream 12927 true Chr5: 1243758-1256684 Arabidopsis thaliana
AT5G04410 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1246685-1256684 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374919 5261 Brassicaceae View MSA
123840129 5264 Brassicales-Malvales View MSA
124341551 5266 SBM View MSA
124243630 5268 Malvidae View MSA
124065810 5270 Rosid View MSA
123747413 5271 Pentapetalae View MSA
122787453 5272 Eudicot View MSA
122049961 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.133     High  
cufflinks 47.939     High  
cufflinks 25.462       Low
cufflinks 49.037     High  
cufflinks 28.873     High  
cufflinks 47.53     High  

0 Strain