Gene : AT5G04270 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22883//PTHR22883:SF19 - ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN // PROTEIN S-ACYLTRANSFERASE 15-RELATED Genomic Order:  352
Name:  ? AT5G04270 Secondary Identifier:  ? PAC:19670558
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04270 0.5kb upstream 0.5kb upstream 2548 true Chr5: 1182718-1185265 Arabidopsis thaliana
AT5G04270 0.5kb upstream 0.5kb upstream 500 false Chr5: 1184766-1185265 Arabidopsis thaliana
AT5G04270 0.5kb downstream 0.5kb downstream 2548 true Chr5: 1182218-1184765 Arabidopsis thaliana
AT5G04270 0.5kb downstream 0.5kb downstream 500 false Chr5: 1182218-1182717 Arabidopsis thaliana
AT5G04270 1.0kb upstream 1.0kb upstream 3048 true Chr5: 1182718-1185765 Arabidopsis thaliana
AT5G04270 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1184766-1185765 Arabidopsis thaliana
AT5G04270 1.0kb downstream 1.0kb downstream 3048 true Chr5: 1181718-1184765 Arabidopsis thaliana
AT5G04270 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1181718-1182717 Arabidopsis thaliana
AT5G04270 2.0kb upstream 2.0kb upstream 4048 true Chr5: 1182718-1186765 Arabidopsis thaliana
AT5G04270 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1184766-1186765 Arabidopsis thaliana
AT5G04270 2.0kb downstream 2.0kb downstream 4048 true Chr5: 1180718-1184765 Arabidopsis thaliana
AT5G04270 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1180718-1182717 Arabidopsis thaliana
AT5G04270 5.0kb upstream 5.0kb upstream 7048 true Chr5: 1182718-1189765 Arabidopsis thaliana
AT5G04270 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1184766-1189765 Arabidopsis thaliana
AT5G04270 5.0kb downstream 5.0kb downstream 7048 true Chr5: 1177718-1184765 Arabidopsis thaliana
AT5G04270 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1177718-1182717 Arabidopsis thaliana
AT5G04270 10.0kb upstream 10.0kb upstream 12048 true Chr5: 1182718-1194765 Arabidopsis thaliana
AT5G04270 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1184766-1194765 Arabidopsis thaliana
AT5G04270 10.0kb downstream 10.0kb downstream 12048 true Chr5: 1172718-1184765 Arabidopsis thaliana
AT5G04270 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1172718-1182717 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364340 5261 Brassicaceae View MSA
123798732 5264 Brassicales-Malvales View MSA
124339802 5266 SBM View MSA
124244765 5268 Malvidae View MSA
124067718 5270 Rosid View MSA
123753562 5271 Pentapetalae View MSA
122794013 5272 Eudicot View MSA
122049119 5273 Angiosperm View MSA
121349855 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.792        
cufflinks 4.156        
cufflinks 2.501        
cufflinks 3.92        
cufflinks 2.345       Low
cufflinks 4.385       High

0 Strain