Gene : KTF1 A. thaliana TAIR10
Primary Identifier:  ? AT5G04290 Defline:  (1 of 1) PTHR11125//PTHR11125:SF8 - SUPPRESSOR OF TY 5 // KOW DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1
Genomic Order:  354 Name:  ? AT5G04290
Secondary Identifier:  ? PAC:19667185
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04290 0.5kb upstream 0.5kb upstream 7085 true Chr5: 1195569-1202653 Arabidopsis thaliana
AT5G04290 0.5kb upstream 0.5kb upstream 500 false Chr5: 1195569-1196068 Arabidopsis thaliana
AT5G04290 0.5kb downstream 0.5kb downstream 7085 true Chr5: 1196069-1203153 Arabidopsis thaliana
AT5G04290 0.5kb downstream 0.5kb downstream 500 false Chr5: 1202654-1203153 Arabidopsis thaliana
AT5G04290 1.0kb upstream 1.0kb upstream 7585 true Chr5: 1195069-1202653 Arabidopsis thaliana
AT5G04290 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1195069-1196068 Arabidopsis thaliana
AT5G04290 1.0kb downstream 1.0kb downstream 7585 true Chr5: 1196069-1203653 Arabidopsis thaliana
AT5G04290 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1202654-1203653 Arabidopsis thaliana
AT5G04290 2.0kb upstream 2.0kb upstream 8585 true Chr5: 1194069-1202653 Arabidopsis thaliana
AT5G04290 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1194069-1196068 Arabidopsis thaliana
AT5G04290 2.0kb downstream 2.0kb downstream 8585 true Chr5: 1196069-1204653 Arabidopsis thaliana
AT5G04290 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1202654-1204653 Arabidopsis thaliana
AT5G04290 5.0kb upstream 5.0kb upstream 11585 true Chr5: 1191069-1202653 Arabidopsis thaliana
AT5G04290 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1191069-1196068 Arabidopsis thaliana
AT5G04290 5.0kb downstream 5.0kb downstream 11585 true Chr5: 1196069-1207653 Arabidopsis thaliana
AT5G04290 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1202654-1207653 Arabidopsis thaliana
AT5G04290 10.0kb upstream 10.0kb upstream 16585 true Chr5: 1186069-1202653 Arabidopsis thaliana
AT5G04290 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1186069-1196068 Arabidopsis thaliana
AT5G04290 10.0kb downstream 10.0kb downstream 16585 true Chr5: 1196069-1212653 Arabidopsis thaliana
AT5G04290 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1202654-1212653 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370737 5261 Brassicaceae View MSA
123833392 5264 Brassicales-Malvales View MSA
124340117 5266 SBM View MSA
124241901 5268 Malvidae View MSA
124074331 5270 Rosid View MSA
123745938 5271 Pentapetalae View MSA
122796587 5272 Eudicot View MSA
122051188 5273 Angiosperm View MSA
121344131 5274 Embryophyte View MSA
123426539 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.307        
cufflinks 14.562        
cufflinks 7.221       Low
cufflinks 15.305       High
cufflinks 6.806       Low
cufflinks 13.11        

0 Strain